Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi67g00031 | ATGTCTTACTTTGAGAACTCAATAGGTGAAATTTCTGAGCCACTGCTAGCTCAAAAAGTTGAAACAAAACAAACAGAACTAAGGCATGCCACTTTTCTCAGCAAATTGATTTTCTCTTGGATTAATTCTTTACTCACTTTAGGTTATTCAAAACCACTCAATCTTGAAGACATACCTTCCCTTGTTTCTGATGATGAGGCTAACATAGCATATCAAAATTTTGTCAAATCTTGGGAATCACTTATTATAAAGAATAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTATAACTTTCTTAAAAGAAAACATATTAATAGCATTTTATGGATTAATCAGAACTATTTCTGTTGTGATTTCACCTTTAATACTATATGCTTTTGTCAAGTATTCTAATAGAACTGAGGCAGATCTCAGAGTAGGTCTTTCTATAGTTGGTTTCTTGATTGTCTCCAAAGTGTTTGACTCTTTGTCTCAAAGACATTGGTATTTTAACTCAAGGAGGTCAGGTATGAAAATGAGATCAGCTTTGATGGTAGCGATTTATCGAAAGCAGCTAAAACTTTCTAGCTCGGCGAGAACAAGACACTCGGCCGGCGAGATTGTGAATTACATTGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATATAGCATGGACTTCTGCATTGCAACTTGCTCTTTCCGTTGTTATTCTTTTTGGTGTTGTTGGTGTTGGTGCTCTTCCTGGTTTGGTCCCTCTTCTTATATGTGGATTTCTCAATGTACCATTTGCAAGAATGTTACAAAATTGTCAGACACAGTTTATGATTGCACAGGACGAACGTCTTCGATCCACTTCGGAGATTCTAAATAGTATGAAGATAATTAAGTTACAATCATGGGAAGAAAAATTCAAGAACTTAATCGAGTCTCTACGCGATAAAGAGTTCAAATGGTTGTCTAAGGTGCAGATTTTGAAAGCTTCTAGTACATTTCTTTATTGGATGTCTCCTACAGTTGTTTCTGCTGTTGTGTTCCTTGGATGTGCTGTTACCAATAGTGCACCATTGAATGCTGAAACTATTTTCACAGTTATTTCAACATTGAGAAACATGGGAGAGCCTGTTAAAATGATTCCACAGGCTCTATCCATTCTTATTCAAGTTAAGGTTTCCTTTGATCGTCTTAATAACTTTTTGCTTGATGAAGAGCTAAACAAAGATGATAGTGAAAGAAACCTAAAGCAATGTTCGGTTAATGCAGTGGAAATTCAAGATGGTAACTTCATTTGGGATCATGAATCTGTGTCTCCAACTTTAATGGATGTGAATCTAGGAATCAAATGGGGGCAAAAAATAGCAGTTTGTGGACCAGTTGGTGCTGGAAAATCATCACTTTTGTATGCAATACTAGGAGAGATTCCCAGGATTTCAGGAACTGTTAATGTAGGTGGCACTCTTGCTTATGTTTCCCAATCTGCATGGATCCAGAGTGGAACAGTTCGAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATACGAGAAAGCAATTAAGGCTTGTGCCTTAGACAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATTGGTCAGAGAGGGATTAACTTGAGTGGAGGGCAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATACTGACATCTATCTTCTTGATGATCCTTTCAGTGCAGTTGATGCACATACAGCTGCAATACTCTTCAATGACTGTGTCATGACTGCTTTAAGGGAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACTATCTTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGACACGTATGAGAATCTCCTGATATCTGGAACAGCCTTTAAGCTTCTTGTGAGTGCTCATAAGGACACAATTACTGAGTTGAATCAAGTTAATGGAACTAAAAGAGGTTCTGAAAATGAGATTTTGTCTAATCCTCAAAACTCTCATGGTTTTTATCTCAGTAATAATCAAAGTGAGGGAGAGATTGCTAGTATCAAGGGTCCGATTGGTTCACAACTTACAAAAGAGGAAGAAAAAGTGATTGGTAATATCGGATGGAGGCCATTCTGGGATTATATTAATTATTCCAAAGGGACATTTATGATGTGTTTGATCATATTAGGACAATCTGTTTTTTTGGCTTTGCAAACTGCATCAACCTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACAAATGCCACTTTGATCGGAGTTTATACTTTAATTTCTTTTGCTAGTGTTGCTTTTGTATATGTGAGGTCTTACATTACTGCACTGCTTGGACTAAAAGCTTCTACAGCTTTCTTCTCAAGCTTCACTGCAGCTATCTTCAATGCTCCAATGTTGTTCTTTGATTCAACTCCTGTAGGAAGGATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCATCACCTATGTAGCATCTATGACAATTGAAATTGTGGTGATAATTTGTATAATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAATATACATTCAGCTATATTATCAAGCTACTGCTAGGGAACTAATAAGGATCAATGGAACAACCAAAGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGATGGACAATTTTTTCAAAAACTACTTAACACTTGTGGACACAGATGCTTCATTGTTCTTTCATACCAATGTGGCAATGGAATGGGCAATTTTAAGGATTGAAGCACTTCAAAGTTTGACTGCCATCACTGCAGCTTTGTTACTTATTCTACTTCCTCAGGGATATGTATCTCCAGGCCTTGTGGGTCTGTCTCTTTCTTATGCACTTCACTTGACAACGGCCCAAACATTTTGGAGTAAATGGTTTTCCGACATGTTAAATTATATTATATCTGTTGAAAGAATGAAGCAATTCATTCACATACCGGTTGAGCCTCCTGCCAATCTGGATAATAACCGGCCACCATCTTCGTGGCCTTCCAAAGGCAGGATTGATCTTCAAGACTTGGAGATTAGGTATCGTCCTAATGCTCCATTAGTCCTCAAGGGAATTACTTGTACATTTAAAGAAGGGAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGTTGAACATCTGCTCAATTGGGTTGAAGGATTTGAGAACGAGGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGGACAAACCTGGATCCTCTGGGCCTGTACACAGATGATGAAATATGGAAGGCTGTAGAGAAATGCCAGCTTAAAGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTCCTGTGAGTGATGAAGGTGGAAACTGGAGCTTGGGACAAAGACAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTTGTTCTGGATGAAGCTACTGCATCTATTGATTCTTCTACGGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACAGTTGCTCACAGAGTTCCAACCGTAATAGACAGTGACATGGTCATGGTTCTCTCTTATGGGAAAATGGTGGAATATGATGAACCTTCAAAGCTAATGGAAACCAACTCATCATTCTCTAAACTGGTAGCTGAATATTGGTCCAGTTGCAGCAGGAAGAATTCATTCCCAAATATTAGCCAGCAGCAGCAATGA | 3879 | 0.3805 | MSYFENSIGEISEPLLAQKVETKQTELRHATFLSKLIFSWINSLLTLGYSKPLNLEDIPSLVSDDEANIAYQNFVKSWESLIIKNNTKSLVLWSIVITFLKENILIAFYGLIRTISVVISPLILYAFVKYSNRTEADLRVGLSIVGFLIVSKVFDSLSQRHWYFNSRRSGMKMRSALMVAIYRKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHIAWTSALQLALSVVILFGVVGVGALPGLVPLLICGFLNVPFARMLQNCQTQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLIESLRDKEFKWLSKVQILKASSTFLYWMSPTVVSAVVFLGCAVTNSAPLNAETIFTVISTLRNMGEPVKMIPQALSILIQVKVSFDRLNNFLLDEELNKDDSERNLKQCSVNAVEIQDGNFIWDHESVSPTLMDVNLGIKWGQKIAVCGPVGAGKSSLLYAILGEIPRISGTVNVGGTLAYVSQSAWIQSGTVRDNILFGKPMDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDTDIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVIQSDTYENLLISGTAFKLLVSAHKDTITELNQVNGTKRGSENEILSNPQNSHGFYLSNNQSEGEIASIKGPIGSQLTKEEEKVIGNIGWRPFWDYINYSKGTFMMCLIILGQSVFLALQTASTFWLAIAIEIPKVTNATLIGVYTLISFASVAFVYVRSYITALLGLKASTAFFSSFTAAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITYVASMTIEIVVIICIMVSVTWQVLIVAVPAMVASIYIQLYYQATARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMMDNFFKNYLTLVDTDASLFFHTNVAMEWAILRIEALQSLTAITAALLLILLPQGYVSPGLVGLSLSYALHLTTAQTFWSKWFSDMLNYIISVERMKQFIHIPVEPPANLDNNRPPSSWPSKGRIDLQDLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGLNICSIGLKDLRTRLSIIPQEPTLFKGSIRTNLDPLGLYTDDEIWKAVEKCQLKETISKLPSLLDSPVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSSTDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKMVEYDEPSKLMETNSSFSKLVAEYWSSCSRKNSFPNISQQQQ | 1292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi67g00031 | 1292 | FunFam | ABC transporter C family member 5 | 690 | 1020 | - | - | |
Vivi67g00031 | 1292 | ProSitePatterns | ABC transporters family signature. | 544 | 558 | IPR017871 | GO:0005524|GO:0016887 | |
Vivi67g00031 | 1292 | SUPERFAMILY | ABC transporter transmembrane region | 92 | 399 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi67g00031 | 1292 | Gene3D | - | 1022 | 1273 | IPR027417 | - | |
Vivi67g00031 | 1292 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 417 | 640 | IPR027417 | - | |
Vivi67g00031 | 1292 | CDD | ABC_6TM_ABCC_D2 | 721 | 1014 | IPR044726 | GO:0140359 | |
Vivi67g00031 | 1292 | Gene3D | - | 413 | 647 | IPR027417 | - | |
Vivi67g00031 | 1292 | SMART | AAA_5 | 446 | 619 | IPR003593 | GO:0016887 | |
Vivi67g00031 | 1292 | SMART | AAA_5 | 1065 | 1250 | IPR003593 | GO:0016887 | |
Vivi67g00031 | 1292 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 104 | 385 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi67g00031 | 1292 | Pfam | ABC transporter | 437 | 571 | IPR003439 | GO:0005524 | |
Vivi67g00031 | 1292 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 727 | 989 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi67g00031 | 1292 | FunFam | ABC transporter C family member 10 | 87 | 401 | - | - | |
Vivi67g00031 | 1292 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1039 | 1273 | IPR003439 | GO:0005524 | |
Vivi67g00031 | 1292 | Gene3D | ABC transporter type 1, transmembrane domain | 692 | 1019 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi67g00031 | 1292 | Gene3D | ABC transporter type 1, transmembrane domain | 84 | 401 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi67g00031 | 1292 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1029 | 1272 | IPR027417 | - | |
Vivi67g00031 | 1292 | FunFam | ABC transporter C family member 3 | 1022 | 1273 | - | - | |
Vivi67g00031 | 1292 | SUPERFAMILY | ABC transporter transmembrane region | 711 | 1021 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi67g00031 | 1292 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 419 | 642 | IPR003439 | GO:0005524 | |
Vivi67g00031 | 1292 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 28 | 1275 | - | - | |
Vivi67g00031 | 1292 | CDD | ABCC_MRP_domain1 | 419 | 619 | - | - | |
Vivi67g00031 | 1292 | FunFam | Multidrug resistance protein associated1 | 398 | 662 | - | - | |
Vivi67g00031 | 1292 | Pfam | ABC transporter transmembrane region | 758 | 988 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi67g00031 | 1292 | Pfam | ABC transporter transmembrane region | 116 | 364 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi67g00031 | 1292 | Pfam | ABC transporter | 1056 | 1204 | IPR003439 | GO:0005524 | |
Vivi67g00031 | 1292 | CDD | ABCC_MRP_domain2 | 1037 | 1257 | - | - | |
Vivi67g00031 | 1292 | CDD | ABC_6TM_ABCC_D1 | 105 | 393 | IPR044746 | GO:0140359 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi67g00031 | 406 | 666 | Calmodulin-binding Proteins | AT2G36910 | 25.887 | 6.58e-20 | 94.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi67g00031 | - | - | gmx:100784827 | 1990.31 |