Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00031 ATGTCTTACTTTGAGAACTCAATAGGTGAAATTTCTGAGCCACTGCTAGCTCAAAAAGTTGAAACAAAACAAACAGAACTAAGGCATGCCACTTTTCTCAGCAAATTGATTTTCTCTTGGATTAATTCTTTACTCACTTTAGGTTATTCAAAACCACTCAATCTTGAAGACATACCTTCCCTTGTTTCTGATGATGAGGCTAACATAGCATATCAAAATTTTGTCAAATCTTGGGAATCACTTATTATAAAGAATAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTATAACTTTCTTAAAAGAAAACATATTAATAGCATTTTATGGATTAATCAGAACTATTTCTGTTGTGATTTCACCTTTAATACTATATGCTTTTGTCAAGTATTCTAATAGAACTGAGGCAGATCTCAGAGTAGGTCTTTCTATAGTTGGTTTCTTGATTGTCTCCAAAGTGTTTGACTCTTTGTCTCAAAGACATTGGTATTTTAACTCAAGGAGGTCAGGTATGAAAATGAGATCAGCTTTGATGGTAGCGATTTATCGAAAGCAGCTAAAACTTTCTAGCTCGGCGAGAACAAGACACTCGGCCGGCGAGATTGTGAATTACATTGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATATAGCATGGACTTCTGCATTGCAACTTGCTCTTTCCGTTGTTATTCTTTTTGGTGTTGTTGGTGTTGGTGCTCTTCCTGGTTTGGTCCCTCTTCTTATATGTGGATTTCTCAATGTACCATTTGCAAGAATGTTACAAAATTGTCAGACACAGTTTATGATTGCACAGGACGAACGTCTTCGATCCACTTCGGAGATTCTAAATAGTATGAAGATAATTAAGTTACAATCATGGGAAGAAAAATTCAAGAACTTAATCGAGTCTCTACGCGATAAAGAGTTCAAATGGTTGTCTAAGGTGCAGATTTTGAAAGCTTCTAGTACATTTCTTTATTGGATGTCTCCTACAGTTGTTTCTGCTGTTGTGTTCCTTGGATGTGCTGTTACCAATAGTGCACCATTGAATGCTGAAACTATTTTCACAGTTATTTCAACATTGAGAAACATGGGAGAGCCTGTTAAAATGATTCCACAGGCTCTATCCATTCTTATTCAAGTTAAGGTTTCCTTTGATCGTCTTAATAACTTTTTGCTTGATGAAGAGCTAAACAAAGATGATAGTGAAAGAAACCTAAAGCAATGTTCGGTTAATGCAGTGGAAATTCAAGATGGTAACTTCATTTGGGATCATGAATCTGTGTCTCCAACTTTAATGGATGTGAATCTAGGAATCAAATGGGGGCAAAAAATAGCAGTTTGTGGACCAGTTGGTGCTGGAAAATCATCACTTTTGTATGCAATACTAGGAGAGATTCCCAGGATTTCAGGAACTGTTAATGTAGGTGGCACTCTTGCTTATGTTTCCCAATCTGCATGGATCCAGAGTGGAACAGTTCGAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATACGAGAAAGCAATTAAGGCTTGTGCCTTAGACAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATTGGTCAGAGAGGGATTAACTTGAGTGGAGGGCAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATACTGACATCTATCTTCTTGATGATCCTTTCAGTGCAGTTGATGCACATACAGCTGCAATACTCTTCAATGACTGTGTCATGACTGCTTTAAGGGAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACTATCTTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGACACGTATGAGAATCTCCTGATATCTGGAACAGCCTTTAAGCTTCTTGTGAGTGCTCATAAGGACACAATTACTGAGTTGAATCAAGTTAATGGAACTAAAAGAGGTTCTGAAAATGAGATTTTGTCTAATCCTCAAAACTCTCATGGTTTTTATCTCAGTAATAATCAAAGTGAGGGAGAGATTGCTAGTATCAAGGGTCCGATTGGTTCACAACTTACAAAAGAGGAAGAAAAAGTGATTGGTAATATCGGATGGAGGCCATTCTGGGATTATATTAATTATTCCAAAGGGACATTTATGATGTGTTTGATCATATTAGGACAATCTGTTTTTTTGGCTTTGCAAACTGCATCAACCTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACAAATGCCACTTTGATCGGAGTTTATACTTTAATTTCTTTTGCTAGTGTTGCTTTTGTATATGTGAGGTCTTACATTACTGCACTGCTTGGACTAAAAGCTTCTACAGCTTTCTTCTCAAGCTTCACTGCAGCTATCTTCAATGCTCCAATGTTGTTCTTTGATTCAACTCCTGTAGGAAGGATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCATCACCTATGTAGCATCTATGACAATTGAAATTGTGGTGATAATTTGTATAATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAATATACATTCAGCTATATTATCAAGCTACTGCTAGGGAACTAATAAGGATCAATGGAACAACCAAAGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGATGGACAATTTTTTCAAAAACTACTTAACACTTGTGGACACAGATGCTTCATTGTTCTTTCATACCAATGTGGCAATGGAATGGGCAATTTTAAGGATTGAAGCACTTCAAAGTTTGACTGCCATCACTGCAGCTTTGTTACTTATTCTACTTCCTCAGGGATATGTATCTCCAGGCCTTGTGGGTCTGTCTCTTTCTTATGCACTTCACTTGACAACGGCCCAAACATTTTGGAGTAAATGGTTTTCCGACATGTTAAATTATATTATATCTGTTGAAAGAATGAAGCAATTCATTCACATACCGGTTGAGCCTCCTGCCAATCTGGATAATAACCGGCCACCATCTTCGTGGCCTTCCAAAGGCAGGATTGATCTTCAAGACTTGGAGATTAGGTATCGTCCTAATGCTCCATTAGTCCTCAAGGGAATTACTTGTACATTTAAAGAAGGGAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGTTGAACATCTGCTCAATTGGGTTGAAGGATTTGAGAACGAGGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGGACAAACCTGGATCCTCTGGGCCTGTACACAGATGATGAAATATGGAAGGCTGTAGAGAAATGCCAGCTTAAAGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTCCTGTGAGTGATGAAGGTGGAAACTGGAGCTTGGGACAAAGACAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTTGTTCTGGATGAAGCTACTGCATCTATTGATTCTTCTACGGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACAGTTGCTCACAGAGTTCCAACCGTAATAGACAGTGACATGGTCATGGTTCTCTCTTATGGGAAAATGGTGGAATATGATGAACCTTCAAAGCTAATGGAAACCAACTCATCATTCTCTAAACTGGTAGCTGAATATTGGTCCAGTTGCAGCAGGAAGAATTCATTCCCAAATATTAGCCAGCAGCAGCAATGA 3879 0.3805 MSYFENSIGEISEPLLAQKVETKQTELRHATFLSKLIFSWINSLLTLGYSKPLNLEDIPSLVSDDEANIAYQNFVKSWESLIIKNNTKSLVLWSIVITFLKENILIAFYGLIRTISVVISPLILYAFVKYSNRTEADLRVGLSIVGFLIVSKVFDSLSQRHWYFNSRRSGMKMRSALMVAIYRKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHIAWTSALQLALSVVILFGVVGVGALPGLVPLLICGFLNVPFARMLQNCQTQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLIESLRDKEFKWLSKVQILKASSTFLYWMSPTVVSAVVFLGCAVTNSAPLNAETIFTVISTLRNMGEPVKMIPQALSILIQVKVSFDRLNNFLLDEELNKDDSERNLKQCSVNAVEIQDGNFIWDHESVSPTLMDVNLGIKWGQKIAVCGPVGAGKSSLLYAILGEIPRISGTVNVGGTLAYVSQSAWIQSGTVRDNILFGKPMDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDTDIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVIQSDTYENLLISGTAFKLLVSAHKDTITELNQVNGTKRGSENEILSNPQNSHGFYLSNNQSEGEIASIKGPIGSQLTKEEEKVIGNIGWRPFWDYINYSKGTFMMCLIILGQSVFLALQTASTFWLAIAIEIPKVTNATLIGVYTLISFASVAFVYVRSYITALLGLKASTAFFSSFTAAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITYVASMTIEIVVIICIMVSVTWQVLIVAVPAMVASIYIQLYYQATARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMMDNFFKNYLTLVDTDASLFFHTNVAMEWAILRIEALQSLTAITAALLLILLPQGYVSPGLVGLSLSYALHLTTAQTFWSKWFSDMLNYIISVERMKQFIHIPVEPPANLDNNRPPSSWPSKGRIDLQDLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGLNICSIGLKDLRTRLSIIPQEPTLFKGSIRTNLDPLGLYTDDEIWKAVEKCQLKETISKLPSLLDSPVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSSTDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKMVEYDEPSKLMETNSSFSKLVAEYWSSCSRKNSFPNISQQQQ 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00031 1292 FunFam ABC transporter C family member 5 690 1020 - -
Vivi67g00031 1292 ProSitePatterns ABC transporters family signature. 544 558 IPR017871 GO:0005524|GO:0016887
Vivi67g00031 1292 SUPERFAMILY ABC transporter transmembrane region 92 399 IPR036640 GO:0005524|GO:0016020
Vivi67g00031 1292 Gene3D - 1022 1273 IPR027417 -
Vivi67g00031 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 640 IPR027417 -
Vivi67g00031 1292 CDD ABC_6TM_ABCC_D2 721 1014 IPR044726 GO:0140359
Vivi67g00031 1292 Gene3D - 413 647 IPR027417 -
Vivi67g00031 1292 SMART AAA_5 446 619 IPR003593 GO:0016887
Vivi67g00031 1292 SMART AAA_5 1065 1250 IPR003593 GO:0016887
Vivi67g00031 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 385 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00031 1292 Pfam ABC transporter 437 571 IPR003439 GO:0005524
Vivi67g00031 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 727 989 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00031 1292 FunFam ABC transporter C family member 10 87 401 - -
Vivi67g00031 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1273 IPR003439 GO:0005524
Vivi67g00031 1292 Gene3D ABC transporter type 1, transmembrane domain 692 1019 IPR036640 GO:0005524|GO:0016020
Vivi67g00031 1292 Gene3D ABC transporter type 1, transmembrane domain 84 401 IPR036640 GO:0005524|GO:0016020
Vivi67g00031 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1272 IPR027417 -
Vivi67g00031 1292 FunFam ABC transporter C family member 3 1022 1273 - -
Vivi67g00031 1292 SUPERFAMILY ABC transporter transmembrane region 711 1021 IPR036640 GO:0005524|GO:0016020
Vivi67g00031 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 419 642 IPR003439 GO:0005524
Vivi67g00031 1292 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 28 1275 - -
Vivi67g00031 1292 CDD ABCC_MRP_domain1 419 619 - -
Vivi67g00031 1292 FunFam Multidrug resistance protein associated1 398 662 - -
Vivi67g00031 1292 Pfam ABC transporter transmembrane region 758 988 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00031 1292 Pfam ABC transporter transmembrane region 116 364 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi67g00031 1292 Pfam ABC transporter 1056 1204 IPR003439 GO:0005524
Vivi67g00031 1292 CDD ABCC_MRP_domain2 1037 1257 - -
Vivi67g00031 1292 CDD ABC_6TM_ABCC_D1 105 393 IPR044746 GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00031 406 666 Calmodulin-binding Proteins AT2G36910 25.887 6.58e-20 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00031 - - gmx:100784827 1990.31