Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi67g00018 ATGCAAGACCCAACAACATTTCAACCCATGAAACCAAATTTCCCTGAACAAGAACAACTCAAATGTCCACGTTGTGAATCAAGCAACACAAAATTCTGTTACTACAACAACTACAACCTCTCACAGCCACGCCATTTTTGCAAGAACTGTAAAAGGTATTGGACCAAAGGTGGTTCTTTGAGGAACATTCCTGTTGGTGGTGGAACACGAAAAGTCACAAAACGTTCTTCAAATCCCAAACGTTCAACAACAACTACGTCTTCATCTTCTCCATCACCATCAATCACTTCTTCAGCTCAAGCTTCTTCAGCTCAAATTTCTTCAGTTCAAGCCTCTTCTGTTCCAGACTCTGACCCGACCCAGATTCGTATTGACCCGGTTGAGCCAAGTTTTGGTGGAGGGAGCTTTAGTTCGCTTCTTGCATCAACTGAGCGGTTCGGGAACCTTTTTGAGGGTCTGAATTCAAATGGGTCGGGTTTAAAAATGGTGGAAATGGGTGAATTTGGGGAGAATTTGAATCATGACCCGGTTATGAATTCGGATTCGGGTCACACTCATAACCCGAATGTTAGAAATGGTGAATCAGAGATCTTTCTTGGTTTGCAAAGTGGTGATACAAGTTGTTGGAATGGGAACCATGGTTGGTCTGATCTTGCAATATACACACCTAGTTCAACTTATCAGTAG 687 0.4265 MQDPTTFQPMKPNFPEQEQLKCPRCESSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGSLRNIPVGGGTRKVTKRSSNPKRSTTTTSSSSPSPSITSSAQASSAQISSVQASSVPDSDPTQIRIDPVEPSFGGGSFSSLLASTERFGNLFEGLNSNGSGLKMVEMGEFGENLNHDPVMNSDSGHTHNPNVRNGESEIFLGLQSGDTSCWNGNHGWSDLAIYTPSSTYQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi67g00018 228 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 154 IPR045174 GO:0003700|GO:0006355
Vivi67g00018 228 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Vivi67g00018 228 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Vivi67g00018 228 MobiDBLite consensus disorder prediction 78 119 - -
Vivi67g00018 228 MobiDBLite consensus disorder prediction 61 129 - -
Vivi67g00018 228 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi67g00018 5 150 C2C2-Dof Transcription Factor Family AT1G51700 52.740 4.69e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi67g00018 zf-Dof 7.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi67g00018 - - vvo:131618111 383.259