Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi679g00004 ATGTGGAACCCTTTATCATGGGTTATGGAAGCTGCTGCTATCATGGCCATTGCTTTGGCTAATGGAGGTGGAAGACCTCCAGATTGGCAAGATTTTGTTGGAATCATTGTTCTCTTGGTCGTCAACTCGACTATCAGTTTCATCGAAGAAAACAACGCCGGTAACGCCGCCGCTGCTCTCATGGCTGGTTTAGCTCCCAAGGCCAAGGTACTAAGAGATGGTAAATGGGGTGAACAAGATGCTGCAATTCTAGTACCAGGAGATATAATCAGCATCAAGTTAGGAGACATCATTCCGGCCGATGCGCGTCTACTTGAGGGAGATCCTTTAAGTGTTGATCAATCTGCTTTAACAGGAGAATCTCTTCCTGTCACAAAGGGTGCAACTCAAGAAGTGTTTTCAGGATCGACCGTTAAGAAGGGTGAGATCGAAGCGATTGTGTATGCAACTGGTGTACACACGTTTTTCGGTAAAGCGGCTCATTTGGTTGATAGTACTAATCAGGTTGGACATTTCCAGCAAGTGCTTACCGCTATCGGAAACTTCTGCATTTGTTCGATTGCGGTTGGAATAGTCATTGAACTTATTGTGATGTATCCGATTCAACATCGCAAGTATAGAGACGGAATTGATAATCTTTTGGTGCTTTTGATCGGTGGAATCCCGATTGCAATGCCAACTGTTTTGTCTGTTACTATGGCTATTGGTTCACATAAGCTTTCACAGCAAGGTGCAATTACAAAGAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTTCTTTGCAGTGATAAAACTGGAACTCTCACTTTGAATAAGCTTAGCGTTGATAAAAACTTGATTGAAGTGTTTGCTAGGGGAATGGATAAGGATTTGGTGATACTTTTAGCCGCAAGAGCTTCTAGGATAGAAAATCAGGATGCTATCGATGCTGCTATCGTTGGAATGCTGTCTGATCCACAAGAGGCTAGAGCTGGTATCAATGAGGTCCATTTTCTGCCGTTCAATCCCGTTGATAAGAGGACTGCTCTTACCTATAGTGATTCTGATGGAAATTGGCATAGATCTAGCAAAGGTGCTCCCGAGCAGATATTGGATCTTTGTAACTGCAAAGAGAATGTGCGGAGAAGTGTTCATGCAATGATTGACAAGTTTGCCGAGCGTGGACTTCGATCTTTAGGTGTTGCTTGTCAGGAAGTACCTGAGAGAACCAAAGAGAGTGCTGGTGCACCATGGCAATTTGTTGGTTTGTTGCCACTATTTGATCCTCCTAGACATGATAGTGCTGACACAATTCGAGAGGCTCTTAATCTTGGTGTGAATGTTAAGATGATCACAGGGGACCAGCTTGCCATTGGAAAGGAAACCGGTAGAAGGCTTGGAATGGGAACAAACATGTATCCATCATCTGCATTGCTTGGTGAACACAAAGATGCTTCGACTTCAGATATTCCTATTGACGAGTTGATTGAAAAGGCCGATGGATTTGCAGGAGTATTTCCCGAACACAAATATGAAATTGTCAAGAGGCTGCAAGATAGGAAGCATATATGCGGAATGACAGGAGATGGCGTAAACGATGCTCCTGCTTTAAAGAGAGCCGATATCGGAATTGCTGTTGCGGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTTACTGAACCTGGTTTGAGTGTCATTATCAGTGCTGTCCTCACCAGCAGGGCCATTTTCCAGAGAATGAAGAATTATACCATTTATGCCGTGTCAATCACCATCCGTATCGTGTTAGGTTTCATGCTCATTGCTTTGATTTGGAAATTCGATTTTGCACCTTTCATGGTGTTGATCATTGCAATACTGAATGATGGTACCATTATGACAATTTCAAAAGATAGAGTGAAAGCATCTCCACTGCCAGACAGTTGGAAACTAAAGGAAATATTTGCAACCGGTATTGTTCTCGGCAGCTACATGGCACTAACAACTGTCATATTCTTCTGGGTGATGCATGACACCGATTTTTTCTCGGACAAGTTTGGTGTGAAGCCTTTGAGACATAGTCCTACTGAAATGATGGCAGCTCTATATCTACAAGTTAGTATAATAAGTCAGGCACTAATTTTCGTAACCAGGTCTCAAAGATTCTCTTTCGTGGAAAGACCCGGTGTTCTCCTAGTAGCCGCTTTCCTTTTGGCTCAACTGTTAGCAACTGTAATAGCAGTGTATGCTGATTGGAATTTTGCAAGAATAAAAGGAATGGGATGGGGTTGGGCCGGCGTAATTTGGTTGTACAGTTTGGTAACCTATATTCCTCTTGATTTACTCAAGTTCGCAATCCGATATATTCTAAGTGGAAAGGCGTGGAATAATGTTTTCGAAAATAGGGTTGCTTTCACTTCAAAGAAAGACTATGGCAGAGAAGAAAGGGAAGCACAATGGGCAACAGCACAAAGATCACTTCATGGTCTTAGGCCTGCTGTCTCCACCCTTTTCAATGAAAATACTAGCTATAGAGAGCTCTCAGAGATAGCGGAACAAGCCAGGAAACGCGCTGAAGTTGCCAGGATTATGGAGCAGAGTACTTTGAAGGGACGCGTTGAGTCGGTGGCGAAGCTTAAGGGACTTCACATTGATACATCTAAGCAGGGTTATAGCATTTAA 2655 0.4313 MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIVLLVVNSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWGEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKGATQEVFSGSTVKKGEIEAIVYATGVHTFFGKAAHLVDSTNQVGHFQQVLTAIGNFCICSIAVGIVIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFARGMDKDLVILLAARASRIENQDAIDAAIVGMLSDPQEARAGINEVHFLPFNPVDKRTALTYSDSDGNWHRSSKGAPEQILDLCNCKENVRRSVHAMIDKFAERGLRSLGVACQEVPERTKESAGAPWQFVGLLPLFDPPRHDSADTIREALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEHKDASTSDIPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKASPLPDSWKLKEIFATGIVLGSYMALTTVIFFWVMHDTDFFSDKFGVKPLRHSPTEMMAALYLQVSIISQALIFVTRSQRFSFVERPGVLLVAAFLLAQLLATVIAVYADWNFARIKGMGWGWAGVIWLYSLVTYIPLDLLKFAIRYILSGKAWNNVFENRVAFTSKKDYGREEREAQWATAQRSLHGLRPAVSTLFNENTSYRELSEIAEQARKRAEVARIMEQSTLKGRVESVAKLKGLHIDTSKQGYSI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi679g00004 884 Gene3D - 28 749 - -
Vivi679g00004 884 PANTHER CALCIUM-TRANSPORTING ATPASE 1 816 - -
Vivi679g00004 884 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 781 IPR023298 -
Vivi679g00004 884 NCBIfam plasma-membrane proton-efflux P-type ATPase 1 740 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vivi679g00004 884 Gene3D - 833 884 - -
Vivi679g00004 884 Gene3D - 260 559 IPR023214 -
Vivi679g00004 884 ProSitePatterns E1-E2 ATPases phosphorylation site. 265 271 IPR018303 -
Vivi679g00004 884 Gene3D - 275 422 IPR023299 GO:0000166
Vivi679g00004 884 SUPERFAMILY HAD-like 259 569 IPR036412 -
Vivi679g00004 884 FunFam Plasma membrane ATPase 275 422 - -
Vivi679g00004 884 NCBIfam HAD-IC family P-type ATPase 497 612 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 NCBIfam HAD-IC family P-type ATPase 35 282 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 SFLD p-type atpase 245 573 IPR044492 -
Vivi679g00004 884 Gene3D - 66 150 - -
Vivi679g00004 884 CDD P-type_ATPase_H 1 775 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vivi679g00004 884 Pfam haloacid dehalogenase-like hydrolase 259 536 - -
Vivi679g00004 884 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Vivi679g00004 884 PRINTS P-type cation-transporting ATPase superfamily signature 417 428 - -
Vivi679g00004 884 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Vivi679g00004 884 PRINTS P-type cation-transporting ATPase superfamily signature 522 541 - -
Vivi679g00004 884 PRINTS P-type cation-transporting ATPase superfamily signature 545 557 - -
Vivi679g00004 884 PRINTS P-type cation-transporting ATPase superfamily signature 439 449 - -
Vivi679g00004 884 SFLD Haloacid Dehalogenase 245 573 - -
Vivi679g00004 884 FunFam ATPase 4 plasma membrane-type 507 749 - -
Vivi679g00004 884 FunFam Plasma membrane ATPase 415 570 - -
Vivi679g00004 884 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Vivi679g00004 884 PRINTS H+-transporting ATPase (proton pump) signature 379 397 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 PRINTS H+-transporting ATPase (proton pump) signature 494 510 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 PRINTS H+-transporting ATPase (proton pump) signature 694 715 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 PRINTS H+-transporting ATPase (proton pump) signature 522 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 PRINTS H+-transporting ATPase (proton pump) signature 553 578 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi679g00004 884 FunFam Plasma membrane ATPase 66 150 - -
Vivi679g00004 884 Pfam E1-E2 ATPase 65 242 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi679g00004 1 884 Primary Pumps ATPases AT2G07560 81.448 0.0 1478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi679g00004 K01535 - gmx:100785442 1500.34