Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi679g00003 ATGGGACTGGATGTATGTACCTGCATTTCCTGCAACACGGAAGTAAAAAAAGGTCCCGACCTACAACTCCATTACAAATCCGAGTGGCATCGCTACAATCTCAAACGCAAGGTGGCTGGGGTTCCTGGGGTGACAGAAGCTTTGTTTCTAGCTAGGCAATCGGCGCTTGCTCAAGAGAGAGATAAGTCTAATGAAACCCCGATGCTTTATAGCTGTGGTGTATGTGGCAAGGGGTATAAAAGTGCTAAGGCTCATGCTGAGCATCTGAAGTCGAGAACTCATATGGCTCGGGCTTCTGAGGGAGCGAGTCATTCGGATGGGAAAGCTATAATCAAGCCACTTGCACCGCGTGTTGTGAATAAGCCTCCTCCTAGAAGATTGGTAGATGATGATGCTGAAGAGGAAGACAGTGAGGATGAATGGGAGGAGGTTGATTCTGATGATGATTTGATTGATGATGCTGAGAAGTCGTTGACTGATTTGAACATGGATGAGAATGCTGAAAATGATGATATGGATGAAGATGATGTTGTGGATTTGGATCCGTCGTGTTGCTTTATGTGTGATCACAAGCATAAGACTATAGAAAACTGTATGGTTCATATGCACAAGCACCATGGGTTCTTTATTCCTGATGTTGAGTATTTGAAAGATCCAAAAGGGCTCCTCACTTATCTTGGTCTAAAGGTCAAAAGGGACTACTTGTGTCTGTACTGTAACGATAGGTGTCATCCTTTCAGCAGCTTGGAAGCTGTCAGGAAACATATGGTAGCAAAAAATCACTGTAAAGTGCATTATGGTGATGATGATGATGAGGAGGAAGTAGAGCTGGAAGAATTCTATGATTATACCAGCAGTTATGTTGATGATCAAGGGAAGCAGCTAGTTGCATCTGGTGATGCTGATAATAATGTAGAACTTAGTGGTGGGTCTGAGCTTGTAATCACTAAGATGTCTGGTGATAGAAAATCAACCAGAACTCTTGGTTCCCGGGAATATTTGCGTTATTATCGTCAGAAACCAAGGCCATCTCCAGCTAACAACATTGCCATTACTGCTGAATTGGCTTCAAGGTACAGGAGCATGGGTTTGGCCACTGTCCAATCAAGGGAGCAACTTGTGAGAATGAAAGTGTTGAAGCAGATGAACAAATCAGGTGTGGAGCATATGCGTAGCAAGATAGGGATGAAGAGTAATGTCATCCGGAACTTGCCAAACAATGTCACGTATTAG 1233 0.4363 MGLDVCTCISCNTEVKKGPDLQLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSALAQERDKSNETPMLYSCGVCGKGYKSAKAHAEHLKSRTHMARASEGASHSDGKAIIKPLAPRVVNKPPPRRLVDDDAEEEDSEDEWEEVDSDDDLIDDAEKSLTDLNMDENAENDDMDEDDVVDLDPSCCFMCDHKHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYLCLYCNDRCHPFSSLEAVRKHMVAKNHCKVHYGDDDDEEEVELEEFYDYTSSYVDDQGKQLVASGDADNNVELSGGSELVITKMSGDRKSTRTLGSREYLRYYRQKPRPSPANNIAITAELASRYRSMGLATVQSREQLVRMKVLKQMNKSGVEHMRSKIGMKSNVIRNLPNNVTY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi679g00003 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 99 IPR013087 -
Vivi679g00003 410 ProSitePatterns Zinc finger C2H2 type domain signature. 72 94 IPR013087 -
Vivi679g00003 410 MobiDBLite consensus disorder prediction 131 149 - -
Vivi679g00003 410 SMART c2h2final6 6 30 IPR013087 -
Vivi679g00003 410 SMART c2h2final6 70 94 IPR013087 -
Vivi679g00003 410 SMART c2h2final6 234 261 IPR013087 -
Vivi679g00003 410 SUPERFAMILY beta-beta-alpha zinc fingers 168 244 IPR036236 -
Vivi679g00003 410 MobiDBLite consensus disorder prediction 96 149 - -
Vivi679g00003 410 Pfam C2H2 type zinc-finger (2 copies) 185 286 IPR041661 -
Vivi679g00003 410 PANTHER ZINC FINGER PROTEIN 622 6 408 IPR040025 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi679g00003 7 410 C2H2 Transcription Factor Family AT4G31420 63.260 6.38e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi679g00003 K14816 - gmx:100796317 607.446