Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi678g00005 ATGGCTCTTCACTATAATCACTTGTTCATTTCTTTATTTTTCTCTTCTTTTATTCTTTTTCTTCCTAACATATACACACTCTCAACTGTTTCAATTTCTGACTCTTCGAATTCAAACCAAACCTTAATCTGTGTCTTACAACAACAACAACAACCTCAAAACAAACAAAAACACTCAAATCTCAATTGTAGTACTTTTCCTCCTAGTACTACTATTAACCTTGAAGTGAATCCTAATGTTTCATATTCTCAAATTGTTGGTGGAAATGGTTTTCTATGTGCATTAACATCATCATCATCAAACTCTTCAAATTCCATCTTAGGTTGTTGGAGATTCTCGAACTCTTCAAATTCCACCATTGTTCCCTTTAAAAGAATCTATCATGGATCATTCATTGAAGACATAGATAGCGGAAATTCCCATGTTTGTGGTCTTGTTAAAGCGAATAACGGTTTACGCGTCGAGTGTTGGCAATGGAAGAGCTTCAGTTCATTCAATTTAAGCTTGAATTTTTCAAGTATTGCAGTTGGAGAGAATTTTGTATGTGGGATAGTAGAAAATGGAAAAGGGAATTCTGTTACTTGCGAAGGAAGTAACAAAGAAGTAGTTGGAAATGAACCAAAGAACGGTGGGAATTATTCGGTGATCGAAGCCGGTTCGAATCATGTTTGTGTGATTTCTAGTGATGGTGGTTTGGATTGTTGGGGTGATGTGGTTGGTGAGAAACCAAAAGGGAGATTCATTGGATTGGCTTTGGGAGAGAAGAGAAGTTGTGCTCTTGGGTATGATGGGTTAGTTCAATGTTGGGGTTTGAATAACTTCACCATGCCATCGAGATTAAAAAGTGCTTTTTTTGAATCAATTGTGGCTAAAAAAAGTGTTTTTTGTGGTGTTTTAGCTTCTAATTACTCTTTGTTTTGTTGGGGAAATGAGGTTTTCGAGGAGTCGAAAAATGCGTTCAAGGTGTTTGATAATGTGCTTCCAGGACCTTGTAAGAGTCGATGTCCGTGTGGGCCTTTATCGGATTCTGCTAAGCTTTGTGTCTCGCCAGGCGTCATTTGTAAAGCTTGTTTACCGATAATTGAGATTCCGTCATCACCGCCGTCGAATCCTCCGTCTCCGGTGGTTGGAAATTCGTCGAAAAGTAGTACTTGGAGCGGGAAAATGGTGGCGTTTCTCGTGATCGGTTGCGTTGGATGCATTTCGTTGTTACTGGTTTTATCTTACTTTCTTTTCAGACACTGCAAAGACTTGGGATGCAAGTCTAGAGTTCATGACTCTGGAAGGTTAGACGATCCTGATCCCGAAACCGAATCGGAGCCTCCTCGTGGCATCCCGATTCTTGAGAAACGGTTAAGCCATGTAATCAGCATGGGAAACGGAGGCACACTTTTGGAGGAATTTTCCCTTCAAAAACTAATTCAAGCCACTAACAATTTCTCTGAACAGAACAAGATCGGCGTTGGAAGTTTCGGGTCGGTGTACCATGGAAAACTCGAAGAAGAAGGAATCGAAGTCGCTATAAAAAGAGCTGAATTGTCATCAACTTCAATTTCTTCTGCACATTTCGGTGTCGCGAGAAAACAAGAAGACCAAGACAACGCCTTTGTGAACGAACTCGAATCTTTATCGAGACTCCACCACAAAAACTTGGTAAAACTACTCGGTTTCTACGAAGACAAACACGAGAGAATCTTAGTCTATGAATACATGAACAACGGAAGCTTAAACGACCATCTCCACAAGTTTCAAACCTCGAATATCATGTCATGGAGCGTCCGTATAAAAGTTGCCTTAGACGCGGCCCGAGGTATAGAATATCTACATAGATACGCTACACCGTCGATCATTCACCGTGACATTAAATCCTCAAACATTTTACTAGACTCAAAATGCGTCGCAAAAGTTTCGGATTTCGGATTATCATTAATCGGCCCAGAAGACGAAGAGTCACATCTCTCACTTCTAGGAGCCGGGACCGTAGGTTACATGGACCCCGAATACTATAGGCTACAACATTTAACAACGAAAAGCGATGTCTATAGTTTCGGAGTTGTTTTATTAGAACTCTTAAGTGGCTACAAAGCTATACACAAAAATGAAAATGGAGTGCCAAGAAATGTGGTTGATTTTATGGTACCATTTATAGTTCAAGATGAGATTCATAGGGTTTTGGATCCAAAGTTGCCACCACCAACACCATTTGAGATTGAAGGTGTGGCTTTTGTAGGTTACTTGGCTTGTGATTGTGTTCGTTTAGAAGGGAGAGATAGACCAAACATGAGCCATGTTGTGAGTAGTTTGGAAAAAGCACTTGAGGCTTGTTTGGCAGAACCTATTCTTTGTGGGTCCAATTCTACTACCACAGTTTCTTCTTATGAGTGA 2385 0.4025 MALHYNHLFISLFFSSFILFLPNIYTLSTVSISDSSNSNQTLICVLQQQQQPQNKQKHSNLNCSTFPPSTTINLEVNPNVSYSQIVGGNGFLCALTSSSSNSSNSILGCWRFSNSSNSTIVPFKRIYHGSFIEDIDSGNSHVCGLVKANNGLRVECWQWKSFSSFNLSLNFSSIAVGENFVCGIVENGKGNSVTCEGSNKEVVGNEPKNGGNYSVIEAGSNHVCVISSDGGLDCWGDVVGEKPKGRFIGLALGEKRSCALGYDGLVQCWGLNNFTMPSRLKSAFFESIVAKKSVFCGVLASNYSLFCWGNEVFEESKNAFKVFDNVLPGPCKSRCPCGPLSDSAKLCVSPGVICKACLPIIEIPSSPPSNPPSPVVGNSSKSSTWSGKMVAFLVIGCVGCISLLLVLSYFLFRHCKDLGCKSRVHDSGRLDDPDPETESEPPRGIPILEKRLSHVISMGNGGTLLEEFSLQKLIQATNNFSEQNKIGVGSFGSVYHGKLEEEGIEVAIKRAELSSTSISSAHFGVARKQEDQDNAFVNELESLSRLHHKNLVKLLGFYEDKHERILVYEYMNNGSLNDHLHKFQTSNIMSWSVRIKVALDAARGIEYLHRYATPSIIHRDIKSSNILLDSKCVAKVSDFGLSLIGPEDEESHLSLLGAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFMVPFIVQDEIHRVLDPKLPPPTPFEIEGVAFVGYLACDCVRLEGRDRPNMSHVVSSLEKALEACLAEPILCGSNSTTTVSSYE 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi678g00005 794 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 208 778 IPR044815 GO:0004674
Vivi678g00005 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Vivi678g00005 794 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 571 777 - -
Vivi678g00005 794 SUPERFAMILY RCC1/BLIP-II 76 311 IPR009091 -
Vivi678g00005 794 Gene3D - 68 326 IPR009091 -
Vivi678g00005 794 ProSiteProfiles Protein kinase domain profile. 480 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi678g00005 794 CDD STKc_IRAK 486 770 - -
Vivi678g00005 794 SMART serkin_6 480 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi678g00005 794 Gene3D Phosphorylase Kinase; domain 1 457 570 - -
Vivi678g00005 794 Gene3D Transferase(Phosphotransferase) domain 1 571 778 - -
Vivi678g00005 794 Pfam Protein kinase domain 481 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi678g00005 794 SUPERFAMILY Protein kinase-like (PK-like) 461 768 IPR011009 -
Vivi678g00005 794 ProSitePatterns Protein kinases ATP-binding region signature. 486 509 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi678g00005 25 779 Receptor kinase-like Gene Family AT5G47850 49.545 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vivi678g00005 Pkinase 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi678g00005 - - pvu:PHAVU_011G003100g 956.051