Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi677g00009 ATGGGTGATGGAGGCGTGGCGTGTATGCCTCTACAGCAGCAGCAGCAACAGCGTGTTATTGAGAAGTTGCCGAGTGCGGCGGAGGAGACGGTTTGTGGAGGGAAGAGTGAGAATGGTGTCAGTTCTGAGTTGGTTAAGGTTCCTGAGAAGAAGAAGGTGATAAAAGTGAAGAAGGTGAAGAAGATTGTGAAAAAAGTTAAGAAGAAAATAGTGCCTGTGAAGAAGAAGGAGAATGTGAACGTGAAAAAAGAATTGGCGTTGGATATAGTGAGCAGCAATGGTGTTGAGAGTGGTGAAATATGTGGGCAGAAGGAAGAAGTTGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCGAGGAATGAATTGGAGAATGGAGAGTTTGTGCCTGAGAAGCTGCTGCCGTTGTCATCCTCACCACCACCACCACCACCACCACGGAGTAATGAAATTGAGAATGGGGATATTGCCACTGAGAGGTGGAAAAAAATGCAGGTGGAGAAGGGCGAAGTTGACATATGGAGAAAAAAGGAGATAATTTCTGAGAAGGGCTGGAAAGGTGAAAATGAGAAAGGGGCATATGGGTCATGGAGAGGTGGTATAAGCAGTGATGTTGAGAAGGGAGAATTTATTCCGGATAGGTGGCATAAAGGAGACACAGGTCAGGATGACTATGGGTACAGTAGAATCAACAGGTACGAGTCATGTCGGGACAAAGGGTGGAAAACTGAACGTGACTGGGAGTGTACACCATCTTCTGGGAGGTATGCAGGTAATGATTTTTATAGGAAGAAGGAATTTAATAGAAGTGGGAGTCAGCATGTTAAAAGTGCACCTAGGTGGGAAGGTGGACAAGAGAGAAATATAAGGATCAGTTCAAAGATTGCGGATGAGGAGAAAAATGAATACAATGGTAGGATACATGCACGGGAATATTCTTCTGGAAGTCGTTTGAAGAGGCATGGCAATGATTCAGACGGCTGGGAGCGGAAGCAGTATGGAGATTATGCTGGTTTCAAAAGTCGAAGACTATGTGACGATGGCTCACACCATGTCTATTCTGATCACCATGTTTATTCAGAGAATCATTCTCGCCATTCTGTGGAGAGATCCTACAGAAACAGTTCTTCGAAGTTGTCTGCCGATAAGTATTCTTCTAGGCATCATGAATCTTCTTTGCCTACCAGATTAGCTTATGATAAACATGGATGCAGTCCCCGTCATTCTGAACGATCTCCACACGATCGAGCTAGATATTATGATAATAAAGATCACACTTCTGCCCGTCGGTCACCCTATGGCCGTGATAGATCACCCTATGACCGTGATAGATCACCCTATGGCCGTGATAGATCTCCGTATAGCCGTGAAAGATCTCCATATAGCCGTGACAGATCTCCATATAGCCGTGAGAGATCTCCATATAACCGTGAGAAATCTCTGCATGGTCGTGAAAGATCTCCATATAGCCGTGAGAGATCTCCATATAACCGTGAAAAATCTCTACATGGTCGTGAAAGATCCCCATGTGATAGGAATTGGGATAGAAGTCGTAACCGTGATCTCAAATTAAGAAGTCCCATTCACGCTGAGCGGTCCCCACAAAATCGTGGTCGGCATCATGGCTACAGGGACCGAACTCCAAACTTGATAGAGCAATTCCCATTTGATCGAACTAGACAAAATAATGATCGAGAAACAAGTAATAAAACCTTATCAACTGAAAAACATAATTCACAACATAGCTGTAAGAATCCTGAAAACAAAAATATTCAAAAGGAGCCAACTCTTTCAGGTAAAGAATTGATAGGGGAAAGAAGTGTTCACGATGCCAATGGGCCTGTTGTGAAAGGTGTCTGCAATGAACCTGAAAAGGAACAAGAGTCCTGCAGGCCAGCTATAAACTGCCAAGATTCTCCTTGCTTGCTCCTACCTACTGAGGAGCAGCCTTCTATGGAAGAAGATATGGACATATGTGATACTCCCCCACATGTTCCTGTGTTTGCTGATTCATCATCAGGAAAATGGTTTTACCTTGATTATTGTGGTTTGGAACATGGTCCTTCTAAATTATCTGACATCAAGGTTCTTGTTGACGAGGGTGTATTAATGTCGGATCATTTTATTAAGCACATTGACAGTGACAGATGGTTAACTGTTGAGAATGCAGCATCACCACTGGTAGCTCAGAGTTTTCCATTGATTGTGTCAGACTCCATAACCCAGCTTGTAAATCCTCCAGAAGCTTCCGGTAATCTTTTGTCAGATACTGGAGATATTCTTCAATCTGGACCCAAGAATGATCAGGAAAGGCAAGCCCCTTTCCTGAAGTCAATGTTATACCCTGATGACAATATGCTTGCACCTGAGCCGTTGGATGACCTCCATTTTGATGAAAGGGTCGGTGTTCTGTTAGAGGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATAACAGAAGCCCTGCAAATGAATTTTGAATATGCAGAGTGGGACGATTTGGGAGCCTACAAAGGTTTTCCTGAGCCCGATACTTGCCTGAGCATGGACCATGATTCAAAAGTTGATTTTGCATCAAATGAGCAAGACTTCGACAAGGATAACGGCTTTACCCTTGGCGTTCCTGATGACTGGTTTTCTGCTCAATGGTCATGCAAAGGCGGTGACTGGAAGAGGAATGAGGAATCCCAAGATAGATATTCTAAAAAGAAACTGGTCCTAAATGATGGGTTTCCTCTATGTCAAATGCCTAACTATGGATGTGAAGATCCTCGGTGGGCTAGGAAAGAAGACTTGTATTATCCATCTCACAATAGAAAGCTTGACATTCCTCTTTGGGCTTTTTGTACTGATGAGTTGGTTGATTGCAGTGGTACTGTGAGCAGACCAGTTCAAAGCAAGTTTATTTCTGTTAGAGGAGTAAAAGGAAATGTTCACTCAGTGGTCAGGATAAATTCATGCGTGGTCAAGGACCAGGGATCATTGGTCTCTGAGTCACACCACAAGACCCAAGGCAAGGATAGATATCATTCAAGGTCAGCCCGACCTTTATCATCAACCAGGGATAGCAAGAGATCATCATCTGAAGAAGATTCACAGTTTAAAACTGTTATTGATCAAGGTTCTCAAGGCTATTGCAAGAGTGTAGAATCCATTAATATTTCTCAAGATCATCTCTGTGCCGTCCATGACTTGCAGTTGCATTTGGGCGACTGGTATTATCTTGATGGTTCGGGGCGAGAAAGAGGACCTTCGTCGTTTTCAGATCTACAGTCTTTAGTAGACCAAGGAATTATAAAGAAGTATAGCAGTGTGTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACATCTTCAACAGAAACTTTGGATGTCCATCACAAGAGCCACCAAGAAAGCAGTTCAGCGTCTAGTGAATTTTCAGAACATCAAGGTGTTTCATTTGGTGAACCCCATTCTAAGTCAAATATGTTTAACAGCATATACCCCCAGTTTGTTGGTTATACTCGCGGGAAACTACATGAATTAGTAATTAAATCATATAAGAGCCGGGAATTTGCTGCAGTAATAAATGAGGTTTTAGATCCTTGGATCAATGCAAGACAACCAAAGAAGGAAGTTGAGAAACAAATATATTGGAAATCAGAAGGTGATGCGCATGCTTCCAAAAGAATCCGGGTGCTGGTTGAAGATAGTGAAGAAGAGAGTGATTTTGAAGATGACAGCTTTATTATTGAGAATGATAAATCCACTCTTGAGGCCCTGTCTGGTGATGTTACTTTCTCTGCTGAAGAGAACGGCGTTACTGTTTCCAAGGAGGAAAGGTGGGGCTTATTGGACGGTCGAATGTTGGCACGAGTCTTCCACTTCTTGAGGTCTGATTTGAAGTCTCTCGTCTTTGCGTCCATGACATGCAAGCATTGGAAAGCGTCTGTAAAGTTTTACAAAGAAGTTTCGAAAAATGTCAACTTGTCATCCCTTGGCCATTTTTGCACCGATTCCATACTTTGGAATATTGTGAATGCCTATGAAAAAGACAAAATCAAATCTATGATTCTAATGGGTTGCACCAATATTACTGCTGACATGCTAGAGAAAGTGTTTCTCTTATTTCCTGGTTTATCTACTGTAGATATCAGAGGGTGCAATCAGTTTGAGGAGCTCACTCCTAAATTTTCCAATGTGAAATGGATCAAGAGCCGAAATTCACGCATAACTAAAATTGCAGATGAGCCACATAAAATCAGAAGCCTCAAACAGATTACTGATCAATCTTTGTCCGTTTCTAAAGCCAGTAGTTTTGGTATTAGGGATAATTTTGGTGAGCTGAAGGTTTATTTTGATAGTGTGGACAAGAGAGACACGGTGAAGCAATTATTCCGTCAAAATTTATACAAGCGTTCAAAATTATATGATGCAAGAAAGTCCTCTTCTATCCTCTCTAGAGATGCTCGAACAAGACGATGGTCAATTAAGAAGTCGGAAAGTGGTTACAAAAAGATGGAGGAATTTCTTGCTTCAAGACTCAGGGAAATTATGAAGGCAAATGCTTGTGACTTTTTTGTACCCAAGGTTGCAGAAATTGAGGCTAAAATAAAAAGAGGTTATTACAGTGGGCATGGGCTGAGCTCTGTGAAGGAGGACATAAGCAGAATGTGCCGAGATGCAATGAAGGCAAAGAATCGTGGTGATGCTAATGATATGAATCATGTTATCTCATTATTTATTCAGCTTGCAACACGGTTGGAGGAAAGTTCTAAATATGTGAATGATAGAGATGCGCAATTGAAGTTATCGGGAAATGACTTACCGTTGGCATTCTGTTCTACTTCCTCTAAGTACAAGAAGAATAGATTAGTGACTGAGAGAAAGTATAGGAGTGATGGAATACATGGTGGTTTGGATAATGGAGAGTATGCTTCTGATAGAGAAATCAGAAGGCGTTTATCAAAATTGAATAAGAAATCTATGGACTCAGAGAGTGAGACATCTGATGACCTTGATAGGTCTTCTGAAGATGGCAATAGTGACGGTGATACTTCAACCTCCAATACTGATAGTGACCAAGAAGCTCATCTAGAGAGACGAACCAGAGAATCAAAGGGAAATGGATACTTCACACCTAGTGATGGGTTGGATTTCATTACAGATGAACGTGAATGGGGAGCTCGTATGACGAAAGCAAGTTTGGTTCCTCCTGTTACTCGGAAATATGATGTCATTGATCAATATGTCATTGTAGCTGATGAGGATGATGTGCAAAGGAAGATGCGGGTTTCACTACCAGATGACTATGCAGAGAAGTTGGCTGCACAAAAGAATGGCACTGAGGAGTCTGATATGGAACTTCCTGAAGTCAAGGATTACAAACCTAGAAAAAGGCTTGAAAATGAGGTTATTGAGCAAGAGGTTTATGGAATCGATCCCTATACACACAATCTTTTACTTGATTCTATGCCTGAGGGGTTAGATTGGTCTCTTCAAGAGAAGCATGTGTTTATAGAAGAGACACTCCTTCGGACATTGAATATGCAAGTTAGGCATTTTACCGGAACTGGAAGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATCCAAGAGATTGAAAGGTGTGCAGAGGAGCACCGTGACGCAAGAATGATTGGTATGTGCCAAGGTATCCTAAAAGCCATAGGCAGACGTCCTGATGATAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCAATAAGGAAGAGGGCTTTGGCGAAGATGATTTTGTCGTGGAGTTTCTTGGAGAGGTGTATCCTGTATGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTGCAAAAAAATAGCAAAGATCCAGCACCAGAATTTTATAACATATACCTCGAGAGGCCAAAGGGTGATGCTGATGGTTATGACTTGGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGGCGGTCATTATCAAATTGGTATATATAGTGTTCGTAAAATTCAACATGGCGAGGAGATCACTTTTGATTACAACTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCAGTCTGTTTATGTGGAAGCCAAGTTTGCCGAGGAAGCTATCTAAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAAGAGTGGCATGGAATTCTTGACTGTCATTATTTGATGCTAGAAGCCTGTGAATTAAACTCCGTTTCTGAAGAGGACTACAATGACTTGGGAAGAGCTGGTTTAGGCAATTGTTTGCTTGGAGGCTTGCCAGATTGGCTAGTTGCTTATGCGGCTCGCCTTGTGAGATTTATTAATTTTGAAAGAACTAAACTTCCTGAGGCAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGTGACGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCTGTCACGCTTGATAAGGGTCAGGATCACTGCTAA 6558 0.4201 MGDGGVACMPLQQQQQQRVIEKLPSAAEETVCGGKSENGVSSELVKVPEKKKVIKVKKVKKIVKKVKKKIVPVKKKENVNVKKELALDIVSSNGVESGEICGQKEEVEEGELGTLKWPRNELENGEFVPEKLLPLSSSPPPPPPPRSNEIENGDIATERWKKMQVEKGEVDIWRKKEIISEKGWKGENEKGAYGSWRGGISSDVEKGEFIPDRWHKGDTGQDDYGYSRINRYESCRDKGWKTERDWECTPSSGRYAGNDFYRKKEFNRSGSQHVKSAPRWEGGQERNIRISSKIADEEKNEYNGRIHAREYSSGSRLKRHGNDSDGWERKQYGDYAGFKSRRLCDDGSHHVYSDHHVYSENHSRHSVERSYRNSSSKLSADKYSSRHHESSLPTRLAYDKHGCSPRHSERSPHDRARYYDNKDHTSARRSPYGRDRSPYDRDRSPYGRDRSPYSRERSPYSRDRSPYSRERSPYNREKSLHGRERSPYSRERSPYNREKSLHGRERSPCDRNWDRSRNRDLKLRSPIHAERSPQNRGRHHGYRDRTPNLIEQFPFDRTRQNNDRETSNKTLSTEKHNSQHSCKNPENKNIQKEPTLSGKELIGERSVHDANGPVVKGVCNEPEKEQESCRPAINCQDSPCLLLPTEEQPSMEEDMDICDTPPHVPVFADSSSGKWFYLDYCGLEHGPSKLSDIKVLVDEGVLMSDHFIKHIDSDRWLTVENAASPLVAQSFPLIVSDSITQLVNPPEASGNLLSDTGDILQSGPKNDQERQAPFLKSMLYPDDNMLAPEPLDDLHFDERVGVLLEGYDVIPGRELEAITEALQMNFEYAEWDDLGAYKGFPEPDTCLSMDHDSKVDFASNEQDFDKDNGFTLGVPDDWFSAQWSCKGGDWKRNEESQDRYSKKKLVLNDGFPLCQMPNYGCEDPRWARKEDLYYPSHNRKLDIPLWAFCTDELVDCSGTVSRPVQSKFISVRGVKGNVHSVVRINSCVVKDQGSLVSESHHKTQGKDRYHSRSARPLSSTRDSKRSSSEEDSQFKTVIDQGSQGYCKSVESINISQDHLCAVHDLQLHLGDWYYLDGSGRERGPSSFSDLQSLVDQGIIKKYSSVFRKCDKLWVPVTSSTETLDVHHKSHQESSSASSEFSEHQGVSFGEPHSKSNMFNSIYPQFVGYTRGKLHELVIKSYKSREFAAVINEVLDPWINARQPKKEVEKQIYWKSEGDAHASKRIRVLVEDSEEESDFEDDSFIIENDKSTLEALSGDVTFSAEENGVTVSKEERWGLLDGRMLARVFHFLRSDLKSLVFASMTCKHWKASVKFYKEVSKNVNLSSLGHFCTDSILWNIVNAYEKDKIKSMILMGCTNITADMLEKVFLLFPGLSTVDIRGCNQFEELTPKFSNVKWIKSRNSRITKIADEPHKIRSLKQITDQSLSVSKASSFGIRDNFGELKVYFDSVDKRDTVKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKKMEEFLASRLREIMKANACDFFVPKVAEIEAKIKRGYYSGHGLSSVKEDISRMCRDAMKAKNRGDANDMNHVISLFIQLATRLEESSKYVNDRDAQLKLSGNDLPLAFCSTSSKYKKNRLVTERKYRSDGIHGGLDNGEYASDREIRRRLSKLNKKSMDSESETSDDLDRSSEDGNSDGDTSTSNTDSDQEAHLERRTRESKGNGYFTPSDGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYVIVADEDDVQRKMRVSLPDDYAEKLAAQKNGTEESDMELPEVKDYKPRKRLENEVIEQEVYGIDPYTHNLLLDSMPEGLDWSLQEKHVFIEETLLRTLNMQVRHFTGTGSTPMSYPLQPVIQEIERCAEEHRDARMIGMCQGILKAIGRRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVGGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGNCLLGGLPDWLVAYAARLVRFINFERTKLPEAILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKGQDHC 2185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 134 148 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 995 1034 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 299 330 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 381 546 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 995 1032 - -
Vivi677g00009 2185 Gene3D SET domain 1898 2059 IPR046341 -
Vivi677g00009 2185 CDD SET_SETD2-like 1902 2050 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 349 371 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 349 595 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 572 594 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 1650 1711 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 1126 1151 - -
Vivi677g00009 2185 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 484 2180 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 1650 1675 - -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 130 155 - -
Vivi677g00009 2185 ProSiteProfiles SET domain profile. 1889 2028 IPR001214 GO:0005515
Vivi677g00009 2185 SMART set_7 1894 2034 IPR001214 GO:0005515
Vivi677g00009 2185 SUPERFAMILY SET domain 1903 2051 IPR046341 -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 1134 1151 - -
Vivi677g00009 2185 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2039 2180 IPR045606 -
Vivi677g00009 2185 MobiDBLite consensus disorder prediction 557 571 - -
Vivi677g00009 2185 Pfam SET domain 1973 2028 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi677g00009 SET 7.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi677g00009 K22748 - gmx:100781921 3103.92