Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi677g00003 ATGGAATTGACAAGAATCGGTTGTGCGGTTACTTATGTCATTCTCCTTTGTGCTTTGGCTCATGGGGGCTCAGAGGGGAAAGAAGATGACCTATATAGGAATGGTCCTGTTTCCTCACCTTTCCTCAACCTTCATGGAAAACAGGCGGAGAATGTGAGGAAACATTGCAGGAAAGAATTGACAGAGAAGAACAATGTTGTTAAAGACATCAACCTGCATCCATTGGAAGGAAGCAGTGACATGAGATCTATTCTTCCAACAGAAAACAACATTCACAAAACAACCAAATCATTACCTCCCCATAAGGAAAAAAAAGCATTGGACTGCATAAAAACAAGTGCTACTCCTCCAGCACCTATTTCCGAAGAGAAATTGTCTTCAAGATTCTTGCTAACAAAACATTCTAGATCAACCTTGGCTTTAAAAAACGATCATCATCGTTATAATCGTTATCATCGTCATCATCGAACACATTCAATCGCAGAAACACCACTTGATCATATATCTCCATTGTCACCATTGTCACCGTTGTCACCATTGTCACCATTGCCACCAATGTCTAGTGCTAATAGTCCATCCCCCGAGCATTCACTGGCAGCGCCAATTCATCTTTCAACACCAACAATTTCTTCAACACCATCTCCTACTCCTGTTCCTGTTCCTAGTACATCATCACCTACTCCTGTTCCTGTTCCTAGTACACCATCACCTACTCCTGTTCCTGTTCCTAGTATACCATCGCCTACTCCTGTTCCTAGTATTTTTGAACAGTTACCACCGTCTCCGCAACAATCTGCTCCTCCGTCTCATATAACAAGTGTTCCGATAACTTCGCCGCGTTTACTTAACAATGCTGAGAAAAAGAAGAAAGCAATTATTTTAGCTGCATCTGTATCAGGAATCATAGTCTTGATAGGATTGTCGCTTTGCTATCGTGAGGCCAAGACCGGTAAAGTGGAGAGAGGAGATGACAACCATTTGCTCATATTAACCTCAAATGATTATTCTGGAGGTCCTCAAAAGATTGTCCGATTAGGAGATGCTAATACAGAAGAATCTGGATCCGGTGTTGTTATTAAAAAAGGAAAGAACTCGTCTAATGGAAGAAATCGGTCCATGAAGGCTGGAGATAATAACAATATCACACTGGCAGAAGCGTCAACATCAGCAGATGTGGGACAAGTAACATCAACTTCTTCTGGAATACCAGCCCCTCCGCCTCCTGGCCCACCGCCACCTCCTCCTCCACGGCCACCTGCTCTTGCATTTCGTCCTCCACCGCCTCCAAAATCCAGCCATCCACCACCTGCTCCTCCTCCCAAACCAATGGCTGGTAAAAACAATGGTGTACCTCTTGGACCGCTAAAACAAGAAAGTTCTAGTGAAGGTGGTGCTTCAAAACCTAAACTAAAGCCGTTCTTTTGGGACAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCATTTGTGTTCAATGAAGAAATGATGGAGTCTTTATTTGGTTGCGCCAACCAGAATAAAAATGAACGTAGAAAAGATTCACCTTCTCTAGATACTTCAGTGCATTATATTCAGATTATTGACCCTAAGAAAGCACAGAATTTATCAATTCTATTACGTGCTCTGAATGTGACAACAGTAGAAGTCATTGATGCACTAAACGAAGGTAACGAGATTCCTGTGGAGCTTATCCAAACATTGTTGAAAATGGCACCAACACAAGAAGAGGAACTGAAACTTAGGTTATTCTCTGGAGAACTTTCTCAACTAGGTCCAGCTGAGAGGTTTCTCAAAGTACTGGTTGACATTCCATTCGCTTTCAAACGTCTCGAATCTCTCATGTTCATGTTAATTCTTCGAGAAGAGTTCTCAAGCATCAAGGAATCCTTTGAAACATTAGAGGTTGCTTGCGACAAGCTGAGAAAAAGCAGGTTATTCTTAAAACTACTAGAAGCAGTACTCAAAACTGGAAACCGAATGAATGACGGTACATATCGCGGTGGTGCTCAAGCATTTAGGCTTGACACACTTTTAAAACTCTCAGACGTAAAAGGAACAGACGGAAAAACAACACTATTACACTTTGTGGTTCAAGAAATTATACGTTCGGAAGGAATAAGAGCAGTAAGAACCGAAAGAGCAAGCAGAAGCCTTTCAAGCGTAGGAACAGTGGATGCAGATTACGAAAATGAAGAATCAGAAGAACACTATCGTAGCCTTGGACTTCAAGTAGTTTCAAGCTTAAACAAAGAACTTGAAGATGTTAAAAAAGCAGCACTAATAGACGGCGATGCATTGAGTAAAGCGGTTTCGAAAATGGGCCATTCATTGGTTAAGAGCCGGGACTTTTTGAACAATGATCTTAAGAATTTGGAAGAAGAGAGTGAGTTTCAAATCTGTTTAGAGAAGTTTATGGAACATGCGAAAGGAGAGGTGACGTTGCTTGTTGAAGAAGAAAAGAGGATAATGGGGTTGGTTAAGAGTACAGCAGATTATTTCCATGGGAATGCAGGGAAAGATGAAGGGCTGCGTTTGTTTTTGATTGTGCGAGATTTTTTGATAATATTGGATAAGGTTTGCAAGGAAGTGAAAGAAGCTACATTAAAGGCTATGAAGGCTTCTAACAAGAAAGAGACTCCGTCACCGTCGGTGTCAGTTCCGTCTTCTCCAGATACACGCCAACAGTCGCCACAGCCGCAGCAGCAGTCTTCTGATCTACATAGGCGATTGTTTCCTGCTATTGCGGGGCGGAGAGTGGATTATTCTAGCTCAGATGATGACGATGACTAG 2811 0.4212 MELTRIGCAVTYVILLCALAHGGSEGKEDDLYRNGPVSSPFLNLHGKQAENVRKHCRKELTEKNNVVKDINLHPLEGSSDMRSILPTENNIHKTTKSLPPHKEKKALDCIKTSATPPAPISEEKLSSRFLLTKHSRSTLALKNDHHRYNRYHRHHRTHSIAETPLDHISPLSPLSPLSPLSPLPPMSSANSPSPEHSLAAPIHLSTPTISSTPSPTPVPVPSTSSPTPVPVPSTPSPTPVPVPSIPSPTPVPSIFEQLPPSPQQSAPPSHITSVPITSPRLLNNAEKKKKAIILAASVSGIIVLIGLSLCYREAKTGKVERGDDNHLLILTSNDYSGGPQKIVRLGDANTEESGSGVVIKKGKNSSNGRNRSMKAGDNNNITLAEASTSADVGQVTSTSSGIPAPPPPGPPPPPPPRPPALAFRPPPPPKSSHPPPAPPPKPMAGKNNGVPLGPLKQESSSEGGASKPKLKPFFWDKVNAKPDQSMVWHEINAGSFVFNEEMMESLFGCANQNKNERRKDSPSLDTSVHYIQIIDPKKAQNLSILLRALNVTTVEVIDALNEGNEIPVELIQTLLKMAPTQEEELKLRLFSGELSQLGPAERFLKVLVDIPFAFKRLESLMFMLILREEFSSIKESFETLEVACDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERASRSLSSVGTVDADYENEESEEHYRSLGLQVVSSLNKELEDVKKAALIDGDALSKAVSKMGHSLVKSRDFLNNDLKNLEEESEFQICLEKFMEHAKGEVTLLVEEEKRIMGLVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCKEVKEATLKAMKASNKKETPSPSVSVPSSPDTRQQSPQPQQQSSDLHRRLFPAIAGRRVDYSSSDDDDD 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi677g00003 936 MobiDBLite consensus disorder prediction 359 400 - -
Vivi677g00003 936 SUPERFAMILY Formin homology 2 domain (FH2 domain) 411 878 - -
Vivi677g00003 936 PANTHER FORMIN-RELATED 277 925 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi677g00003 936 MobiDBLite consensus disorder prediction 881 914 - -
Vivi677g00003 936 Pfam Formin Homology 2 Domain 466 863 IPR015425 -
Vivi677g00003 936 MobiDBLite consensus disorder prediction 212 252 - -
Vivi677g00003 936 MobiDBLite consensus disorder prediction 879 936 - -
Vivi677g00003 936 SMART it6_source 462 878 IPR015425 -
Vivi677g00003 936 Gene3D Formin, FH2 domain 467 889 IPR042201 -
Vivi677g00003 936 ProSiteProfiles Formin homology-2 (FH2) domain profile. 460 889 IPR015425 -
Vivi677g00003 936 MobiDBLite consensus disorder prediction 401 445 - -
Vivi677g00003 936 MobiDBLite consensus disorder prediction 347 468 - -
Vivi677g00003 936 PRINTS Proline rich extensin signature 173 185 - -
Vivi677g00003 936 PRINTS Proline rich extensin signature 398 410 - -
Vivi677g00003 936 PRINTS Proline rich extensin signature 237 253 - -
Vivi677g00003 936 PRINTS Proline rich extensin signature 210 231 - -
Vivi677g00003 936 MobiDBLite consensus disorder prediction 172 252 - -
Vivi677g00003 936 MobiDBLite consensus disorder prediction 175 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi677g00003 427 881 FH2 protein (formin) Gene Family AT5G67470 46.104 1.10e-118 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi677g00003 - - vvo:131606706 1423.68