Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi676g00001 ATGACTAAGCAGAATAATGTAGTGGTGACAGTGACACCTGAAGTTAAGTCATGCATTAACACGCTTATCTCCACCGTGGTTTTGCCTAGTGCAGCAACCACGCCGGAGTCGATGGCGGTGATAGGTGGTTTTTTGGGGTTTTCTCATAACAATTTTATTAAGAGATTGGAAGGTGGTAATGTTAATGGTTGGATTGATTCAATGAGAGCCGCTTCTCCAACTCGAGTCAAATCTTCGGAAAATTATCAAGAAAAATGTTCATGGATTCTTTATCATCCTTCGGCGTTGAAATTGTTTGATCAAATATTGTTTAGTTCAAAAGGAAAACAGATTGTGTTTTTTCTTGACTATGATGGAACTCTCTCTCCTATTGTTGCTGATCCAGATAAAGCTTTCATGACAAGAAAGATGAGAGGAACACTTAAGAATGTAGCAAGAAATTTTCCTACAGCTATAGTGACTGGAAGGTGCAGAGATAAGGTATTTAACTTTGTAAAATTGGCAGAGCTATACTATGCAGCAAGCCATGGTATGGACATCATGGGACCAACAAAAAACCAAACTGCTGAAAAAAGTAAAAATGATAGTAATAAAGCAGTGTCGTTCCAACCTGCAAGTCAATTTCTACCAATGATCGACGAAGTGTATAAAATTTTGTTAGAAAAAACAAAATCTGTCCCCGGAGCTATGGTAGAGAACAACAAATATTGCTTATCAGTGCATTTCCGATGCGTTGACGAAAAGAGTTGGGCTCCTTTGGCTGAGAAAGTAAGATTGGTACTGAATGAATATCCAAAACTTAGGCTAACACAAGGAAGAAAAGTGTTGGAGATTCGTCCCACTATCAAATGGGACAAAGGAAAGGCTCTTGAGTTTTTGTTGGAATCTTTAGGATATGAGAATTCTAATGATGTTTTCCCAATCTACATCGGTGATGATCGAACTGATGAGGATGCTTTTAAGGTTTTGAGTAGAAGGGGTCAAGGAGTTGGAATTCTTGTTTCTAGTGTTCCAAAAGAAACAGATGCTTCCTACACTCTTCAAGATCCATCAGAGGTTGAGAATTTTTTGCGGCGATTGGTGGAATGGAAAAGATTGAGTGGTGTGAACCCTACAAGTGCATAG 1125 0.3876 MTKQNNVVVTVTPEVKSCINTLISTVVLPSAATTPESMAVIGGFLGFSHNNFIKRLEGGNVNGWIDSMRAASPTRVKSSENYQEKCSWILYHPSALKLFDQILFSSKGKQIVFFLDYDGTLSPIVADPDKAFMTRKMRGTLKNVARNFPTAIVTGRCRDKVFNFVKLAELYYAASHGMDIMGPTKNQTAEKSKNDSNKAVSFQPASQFLPMIDEVYKILLEKTKSVPGAMVENNKYCLSVHFRCVDEKSWAPLAEKVRLVLNEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLSRRGQGVGILVSSVPKETDASYTLQDPSEVENFLRRLVEWKRLSGVNPTSA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi676g00001 374 CDD HAD_TPP 112 355 - -
Vivi676g00001 374 Pfam Trehalose-phosphatase 114 351 IPR003337 GO:0003824|GO:0005992
Vivi676g00001 374 NCBIfam HAD-IIB family hydrolase 113 326 IPR006379 -
Vivi676g00001 374 NCBIfam trehalose-phosphatase 109 361 IPR003337 GO:0003824|GO:0005992
Vivi676g00001 374 Gene3D - 111 212 IPR023214 -
Vivi676g00001 374 Gene3D - 219 369 IPR023214 -
Vivi676g00001 374 SUPERFAMILY HAD-like 112 363 IPR036412 -
Vivi676g00001 374 FunFam Trehalose 6-phosphate phosphatase 211 370 - -
Vivi676g00001 374 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 51 368 IPR044651 GO:0004805|GO:0005992
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi676g00001 107 360 Trehalose Biosynthesis Gene Families AT1G70290 26.471 2.48e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi676g00001 K01087 - gmx:100788641 570.466