Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi673g00012 ATGAGTTTCTTCTCTGAGGCTACTTCGCGACCGATATTTCCTAGCATGAATGTGAATGAAGATTTGGAGAATAAGGTTGATTCGGTTGAGAATATTTCATCGAGTTCGATTGTGAGGAAGAAGTCGGATATTGTTTTGGTGACGAATAATGGTCGGTTTCAGATAGTTAGAAATGTGATGAGAAATGTGAAAGAGGTGATGTTGGGGACTAAGCTTGTTGTGCTTTTTCCGGCGGTTCCTTTGGCTGTTGCTGCGGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCTTACTTGGACTTGCTCCCCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATCGCATATTTCACTGGCCCAACAGTTGGAGGTCTTCTAAATGCAACTTGTGGCAATGCAACTGAGATGATCATAGCAATATTTGCACTTCACCAGAACAAAATCCATGTTGTCAAATTCTCCTTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTAGGAAGCTCACTCCTTTGTGGTGGCTTAGCAAATCTCAAAAAGGAACAAAGATATGACAGAAAACAAGCTGATGTGAACTCATTGCTTTTGTTGCTGGGATTTCTATGCCATTTGCTGCCATTAATGTTCAAATATGCGTTGGCGGGAGGAAATCATTCTATCGCCAATTGTACTCTTCAATTGTCGAGAGCAAGTAGCATTGTTATGCTTATAGCATATGTTGCTTATATCTTCTTCCAATTGAAAACTCATCGAAAAATATTCGATGCACAAGAGGTGGAAGATGAAGAGGATGAAGAGAAAGCAGTGATTGGATTTTGGAGTGCATTCAGTTGGTTGGTGGGTATGACATTGGTCATATCTGTTCTTTCTGAGTATGTTGTGGGAACCATTGAGGCTGCTTCGGATTCTTGGGGTATTTCTGTGAGCTTTATTAGCATAATTTTGCTACCAATTGTTGGGAATGCCGCGGAACATGCTGGATCAGTCATATTTGCTTTCAAGAACAAATTGGATATATCATTAGGTGTTGCTATGGGATCTGCTACTCAAATTTCTATGTTTGTGGTTCCATTTAGTGTGATTGTTGCGTGGATAATGGGTATACGAATGGATCTAGACTTCAATCTTCTTGAAACTGGATGTCTTGGTTTCGCAATTATTGTTACAGCCTTCACTTTGCAGGATGGAACTTCACACTATATGAAAGGAGTCATTCTTACTTTCTGTTACTTTATCATTTCTGCATGTTTTTTTGTTCTCAAAGCTCCACAAATCAATCAATATGGTATAATCGGTTTCGGAGCAAACACCCCTGTGAAGCCATCTCCAATTGAATGA 1350 0.4022 MSFFSEATSRPIFPSMNVNEDLENKVDSVENISSSSIVRKKSDIVLVTNNGRFQIVRNVMRNVKEVMLGTKLVVLFPAVPLAVAADFYSLGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAIFALHQNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQRYDRKQADVNSLLLLLGFLCHLLPLMFKYALAGGNHSIANCTLQLSRASSIVMLIAYVAYIFFQLKTHRKIFDAQEVEDEEDEEKAVIGFWSAFSWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSVIFAFKNKLDISLGVAMGSATQISMFVVPFSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQDGTSHYMKGVILTFCYFIISACFFVLKAPQINQYGIIGFGANTPVKPSPIE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi673g00012 449 NCBIfam calcium/proton exchanger 58 422 - -
Vivi673g00012 449 Gene3D - 123 266 IPR044880 -
Vivi673g00012 449 Gene3D - 270 423 IPR044880 -
Vivi673g00012 449 FunFam Vacuolar cation/proton exchanger 269 423 - -
Vivi673g00012 449 FunFam Vacuolar cation/proton exchanger 123 268 - -
Vivi673g00012 449 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 36 426 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vivi673g00012 449 Pfam Sodium/calcium exchanger protein 279 418 IPR004837 GO:0016020|GO:0055085
Vivi673g00012 449 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016020|GO:0055085
Vivi673g00012 449 NCBIfam calcium/proton exchanger 77 422 IPR004798 GO:0006816|GO:0015369
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi673g00012 28 428 Antiporters AT2G38170 67.892 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi673g00012 K07300 - gmx:100816844 651.358