Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi672g00001 ATGTTTCATTTTCTCATTCCTAGATTCATTCATCATAAGACACTTTTATGTCGCAATGTTTTTTCTCGTTTATTCAATTTTCGTTCTTTCTCCGTTTCCAGTAATCACATATCTGACAACCTTACATTGTCAAACCTCGTTAACTCATGTAACTTGTCCCCCGAAACTTCCCTTAAACTCTCCGAAAGGTTGAAACAAGTAAAAAACCCTAACGGCCCAAATGCTGTCATTCAACTCTTCAGAAGCTATGGCTTCTCCGATTCCCATATATCAAAGCTTGTCAAGAAACGCCCTTTTCTGCTTTTATCACATCCTGAAAACACCCTTTTGCCAAAGCTTCAATTTTTGCAATCCATTGGGGTTTCACCCACTGATTTCCCCAAAATCCTACTTGGGAACACTTCCTTTTTGTCAGCAAACTTGGAGAAAAACCTAATACCTCGATACGAAATTGTTCGAAGCCTAGTTCGTGACGATAAAGAGGTGGTTTCAGCTTTGAAACATGGATCATGGGTTTTTTACAATGATTCCATGGTTAATGATTCTGTTCCAAACATTGAGGTTTTGAGGAAACTCGGTGTGCCGCAACGTTTTATATCCCTTTTGGTTTGTTATTTTCCTAGTGTTGCATTTCACAAGCATTCCATATTTGTTGAGGCTGTTAATTCAGTCGTCGAAATGGAGTTCAATCCTTTGCAGCTTAATTTTGTTTTGGCTCTTCGAGTTATTGTAAGTATGGATAAAGAAAACTGGGAATCGAAGTTTAAGATTTACGCGAAGTGGGGCTGGTCGAGAGAAGTCTGTCTTTTGGCCTTCCGGAAACGGCCTCAGTGTATATTGATGTCGGAAAAAGGTATTAATAAAACAATGAACTTCTTGGTGAAGGACGCAGGTCTTACACCCGGAGACATTGCTAAATTCCCGGTGATTCTGTCCCGCAACTTGGAGAAGGTGCTTGTCCCTAGATTCGCAGTAGTTAAGATTTTGAAATCAAAGGGTTTGAAAAAGAGGGGTTTGTCCTTAGGCAGCTTTACTTTGATAAGTGAGAAAAAGTTTCTTGAGAAATATGTGACCCCGTTTCAGAAAGATTTGCCATTGTTATTGGATGCGTATAAGGATGCATATAAATCTCATAAGACAGATTAA 1146 0.3918 MFHFLIPRFIHHKTLLCRNVFSRLFNFRSFSVSSNHISDNLTLSNLVNSCNLSPETSLKLSERLKQVKNPNGPNAVIQLFRSYGFSDSHISKLVKKRPFLLLSHPENTLLPKLQFLQSIGVSPTDFPKILLGNTSFLSANLEKNLIPRYEIVRSLVRDDKEVVSALKHGSWVFYNDSMVNDSVPNIEVLRKLGVPQRFISLLVCYFPSVAFHKHSIFVEAVNSVVEMEFNPLQLNFVLALRVIVSMDKENWESKFKIYAKWGWSREVCLLAFRKRPQCILMSEKGINKTMNFLVKDAGLTPGDIAKFPVILSRNLEKVLVPRFAVVKILKSKGLKKRGLSLGSFTLISEKKFLEKYVTPFQKDLPLLLDAYKDAYKSHKTD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi672g00001 381 FunFam Mitochondrial transcription termination factor-like 141 364 - -
Vivi672g00001 381 PANTHER CGI-12 PROTEIN-RELATED 43 359 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 Pfam mTERF 243 353 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 Pfam mTERF 77 299 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 Gene3D Transcription termination factor 3, mitochondrial 157 364 IPR038538 -
Vivi672g00001 381 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Vivi672g00001 381 SMART mt_12 234 264 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi672g00001 mTERF 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi672g00001 K15031 - gmx:106799612 370.163