Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi669g00005 ATGTATCCTAGATTGATACACCCCCACGATGGAATTGTTGGACAAGATGATCTGCAATCTGGTGTTGCTGCTGTCAATCATAAGGGTGATCCTTGTCTTGTTTTGACTGCTGATCCAAAACCTCGTCTTCGTTGGACTCAAGACCTTCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGTCCCAGTAAAGCTACACCAAAAGCAATCATGCGGACAATGAACGTCAAGGGCTTAACTCTATTTCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCAGGAAAAGATATAGGGGAGGGATGCAAAGATGGGATGACAGGTTCCTATCTTTTAGAAAGCCCTGGCACTGATAACTCATCTCCAAAGTTACCTACATCCGATACAAACGAGGGTTACGAAATCAAGGAGGCGTTAAGAGCACAGATGGAAGTGCAAAGTAAATTACATTTGCAAGTGGAGGCAGAGAAGCACTTGCAAATCCGTCAGGACGCAGAGCGAAGATACATGGCTATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATAGGTGCTTCTGTTATAGACACAGACAACCAAAAGTTCCAAGGAATTGAAAATAAACCACCAAGAGCTCCCTTGGTTGACCCTCTTGGCTTTTATTCCTTGCCGTCTACTGAGACGGCCGGAGTGAATGTTCCGGAAGAAGAAATCCCTCCAACCCTCCCACCCCAAAGAGCTGATTGCTCAACCGAAAGTTGTTTAACATCGCACGAGAGCTCTGGAGGATTGACTCTAGAAGGATCTCCAAGTGCAGGGAAAAGAAGAATGCTAGGCATGGAGTCAATGGCGGCGCCTTTGATTTGGAGTGAAGCAAAGATGAAAGCTCAAGCCATCAATATAGGTCAAGGTAATCATCATCTTGGAATAACTAGGTATGGCATGTAA 945 0.4444 MYPRLIHPHDGIVGQDDLQSGVAAVNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDIGEGCKDGMTGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGASVIDTDNQKFQGIENKPPRAPLVDPLGFYSLPSTETAGVNVPEEEIPPTLPPQRADCSTESCLTSHESSGGLTLEGSPSAGKRRMLGMESMAAPLIWSEAKMKAQAINIGQGNHHLGITRYGM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi669g00005 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 24 275 IPR044848 GO:0003700
Vivi669g00005 314 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Vivi669g00005 314 FunFam Myb family transcription factor 39 97 - -
Vivi669g00005 314 MobiDBLite consensus disorder prediction 116 132 - -
Vivi669g00005 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Vivi669g00005 314 Gene3D - 39 97 - -
Vivi669g00005 314 MobiDBLite consensus disorder prediction 235 272 - -
Vivi669g00005 314 MobiDBLite consensus disorder prediction 245 266 - -
Vivi669g00005 314 MobiDBLite consensus disorder prediction 112 132 - -
Vivi669g00005 314 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Vivi669g00005 314 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Vivi669g00005 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi669g00005 8 256 G2-like Transcription Factor Family AT3G24120 44.015 3.38e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi669g00005 Myb_DNA-binding 3.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi669g00005 - - gmx:100782369 556.599