Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi666g00027 ATGGCTCACCATTATTCTAATAAGGTCTTAGGTTGTTTTCTTTTGTTTTCTTTAACCTTAACTTATGGCCATAGTCATTTTCTCATAGATCCAATAATTATTCCTGGATATGAAGTTTCACCAGGACATGATATTGGTGATGGTGATGCGCCAGCTCAATCACCTGAGCCGTTCGTCGGCGATTCTCCAGCTCAATCACCCGAGCCGTTTATGGATGATTCTCCCGCTCCTTCGCCTGAAAAAGACAGTGAAAATGTTGACAAAAGTTTTCCTAATGAGAGGCTAAAACATTCTTATGTTGCATTTCAAGCATGGAAAAAGGCTATTTATTCTGACCCTTTTAACACAACTGGTAATTGGGTTGGTCATGATGTTTGTTCCTACAATGGTGTGTTTTGTTCTCCTGCTCTTGATGATCCTACACTGAATGTTGTTGCTGGTGTTGATATTAATCACGCCGATATCGCCGGTCACCTTCCGGAAGAGTTAGGACTATTGAATGATACTTCTCTTTTCCATATTAACTCAAACAGGTTCTGTGGTATAATTCCGGATAGCTTTGAGAATCTAACCATAATGTACGAGTTTGATATCAGTAACAACCGCTTCGTCGGCGATTTTCCTTTAGTGGTTTTGAAATGGAAAAATTTGACCTACTTGGATATTAGATTCAATGATTTTGAAGGAGTTTTACCTCATGAGCTATTTGAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCACATATACCAGAAACACTTGGAAAATCAACAGCCTCTGTTGTGACTTTTGCAAACAATAATTTTACTGGTTGTATTCCAAAATCAATTGGAAACATGGTGAACTTGAATGAGATTGTGTTCTTAGGAAATGATCTTGGTGGTTGTTTTCCTCAAGAGATTGGTTTGTTAGGGGAAGTAACAGTTTTGGATGCTAGCAAAAATGGGTTTGTTGGGACACTACCAAACTTAGCAGGGTTGAAGAATGTTGAGGTTATTGACATAGCACATAACAAGTTTAGTGGTTATGTTTCCAACACTATTTGTCAACTACCTACTTTGAAGAACTTTACATTTTCTTATAATTACTTTAATGGAGAAGCACAAACTTGTGTTCCTTCAGATAGTTGTTCTGTTGAGTTGGATGATGCCAAGAATTGTTTACCTGGAAGGAAGAATCAAAAGACATCTAAACAATGTTTACCTGTTTTGACTAAACCTGTGGATTGTAGCAAGAACTGTGGTGGAGGAAAAGGAAAGAGTCATGATCCATTAGAGCCTAAACCAACTCCATCAAAATCTCACCCTCCTAAGGTGGAGACACCAAAGGCTAAGCCACCACCAACTCCAAAGGCTCAAGCACCACAAATTCCACCGACACTTCCACCGGTTAAGGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCATCACCACCGGTTAAGTATATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTGTCACCACCACCATCACCACCGGTTAAGCACATTCCACCTATGCTACCACCAGTTGAAGATATCCCACCAACCGTTGCACCGGTGTTTTCACCACCCCCACCGGTTGAGCGTATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCGGTTGAGAAAATCCCACCCATGCTACCACCGGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCAGCTGCTCAAGTCAACTCACCACCACCACCAGTTCACTCTCCTCCACCACCCTCACCAGCCCATTCCCCACCTCCACCAGTCAATTCTCCACCACCACCAGTGTACTCCCCTCCCCCACCCCCGCCAGTCCACTCTCCCCCTCCACCAGTCCATTCACCACCACCTCCAGTTCATTCTCCACCCCCACCAGTCCATTCTCCACCACCACCAATTCATTCTCCTCCACCACCTCCGGTTTACTCTCCTCCACCACCAACTCACTCTCCACCCCCACCAATCCATTCACCACCACCTCCAGTTCATTCTCCACCCCCACCAGTTCATTCTCCACCACCTCCAGTTAACTCCCCACCCCCGCCAGTTCATTCTCCTCCTCCACCGGTCTCCTCACCACCACCACCACCACCACAGGTGCATTCTCCACCACCACCGGTCAACTCACCTCCACCACCAGTACACTCACCTCCTCCTACCCCCGTCAACTCACCTCCACCACCAGTATACTCACCTCCTCCTACCCCCGTCAACTCACCTCCACCACCAGTACACTCGCCTCCTCCTCCCCAGGTCAACTCACCACCATCACCAGTACACTCCCCTCCTCCACCGGTCAATTCACCATCACCACCAAAATGGGATGACATCACACTACCACCAAACATTGGAGCTGAATATAGGTCACCTCCTCCTCCAACAATTGCTGGATACTAA 2736 0.4656 MAHHYSNKVLGCFLLFSLTLTYGHSHFLIDPIIIPGYEVSPGHDIGDGDAPAQSPEPFVGDSPAQSPEPFMDDSPAPSPEKDSENVDKSFPNERLKHSYVAFQAWKKAIYSDPFNTTGNWVGHDVCSYNGVFCSPALDDPTLNVVAGVDINHADIAGHLPEELGLLNDTSLFHINSNRFCGIIPDSFENLTIMYEFDISNNRFVGDFPLVVLKWKNLTYLDIRFNDFEGVLPHELFEKELDAIFLNNNRFTSHIPETLGKSTASVVTFANNNFTGCIPKSIGNMVNLNEIVFLGNDLGGCFPQEIGLLGEVTVLDASKNGFVGTLPNLAGLKNVEVIDIAHNKFSGYVSNTICQLPTLKNFTFSYNYFNGEAQTCVPSDSCSVELDDAKNCLPGRKNQKTSKQCLPVLTKPVDCSKNCGGGKGKSHDPLEPKPTPSKSHPPKVETPKAKPPPTPKAQAPQIPPTLPPVKDIPPTVAPVSSPPPSPPVKYIPPMLPPVEDIPPTVAPVLSPPPSPPVKHIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVSSPPPVEKIPPMLPPVEDIPPTVAPVSSPPPAAQVNSPPPPVHSPPPPSPAHSPPPPVNSPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPPVYSPPPPTHSPPPPIHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPPPVSSPPPPPPQVHSPPPPVNSPPPPVHSPPPTPVNSPPPPVYSPPPTPVNSPPPPVHSPPPPQVNSPPSPVHSPPPPVNSPSPPKWDDITLPPNIGAEYRSPPPPTIAGY 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi666g00027 911 SUPERFAMILY L domain-like 102 373 - -
Vivi666g00027 911 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 569 - -
Vivi666g00027 911 MobiDBLite consensus disorder prediction 434 483 - -
Vivi666g00027 911 MobiDBLite consensus disorder prediction 43 89 - -
Vivi666g00027 911 Gene3D Ribonuclease Inhibitor 98 396 IPR032675 -
Vivi666g00027 911 MobiDBLite consensus disorder prediction 75 89 - -
Vivi666g00027 911 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 98 396 - -
Vivi666g00027 911 MobiDBLite consensus disorder prediction 638 911 - -
Vivi666g00027 911 MobiDBLite consensus disorder prediction 416 483 - -
Vivi666g00027 911 PRINTS Proline rich extensin signature 429 441 - -
Vivi666g00027 911 PRINTS Proline rich extensin signature 499 515 - -
Vivi666g00027 911 PRINTS Proline rich extensin signature 447 463 - -
Vivi666g00027 911 PRINTS Proline rich extensin signature 470 482 - -
Vivi666g00027 911 PRINTS Proline rich extensin signature 527 544 - -
Vivi666g00027 911 PRINTS Proline rich extensin signature 546 571 - -
Vivi666g00027 911 MobiDBLite consensus disorder prediction 638 889 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi666g00027 85 417 Trihelix Transcription Factor Family AT3G19020 68.263 1.55e-172 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi666g00027 - - vvo:131634815 1116.29