Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi666g00026 ATGGCTCACCATTATTCTAATAAGGTCTTAGGTTGTTTTCTTTTGTTTTCTTTAACCTTAACTTATGGCCATAGTCATTTTCTCATAGATCCAATAATTATTCCTGGATATGAAGTTTCACCAGGACATGATATTGGTGATGGTGATGCGCCAGCTCAATCACCTGAGCCGTTCGTCGGCGATTCTCCAGCTCAATCACCCGAGCCGTTTATGGATGATTCTCCCGCTCCTTCGCCTGAAAAAGACAGTGAAAATGTTGACAAAAGTTTTCCTAATGAGAGGCTAAAACATTCTTATGTTGCATTTCAAGCATGGAAAAAGGCTATTTATTCTGACCCTTTTAACACAACTGGTAATTGGGTTGGTCATGATGTTTGTTCCTACAATGGTGTGTTTTGTTCTCCTGCTCTTGATGATCCTACACTGAATGTTGTTGCTGGTGTTGATATTAATCACGCCGATATCGCCGGTCACCTTCCGGAAGAGTTAGGACTATTGAATGATACTTCTCTTTTCCATATTAACTCAAACAGGTTCTGTGGTATAATTCCGGATAGCTTTGAGAATCTAACCATAATGTACGAGTTTGATATCAGTAACAACCGCTTCGTCGGCGATTTTCCTTTAGTGGTTTTGAAATGGAAAAATTTGACCTACTTGGATATTAGATTCAATGATTTTGAAGGAGTTTTACCTCATGAGCTATTTGAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCACATATACCAGAAACACTTGGAAAATCAACAGCCTCTGTTGTGACTTTTGCAAACAATAATTTTACTGGTTGTATTCCAAAATCAATTGGAAACATGGTGAACTTGAATGAGATTGTGTTCTTAGGAAATGATCTTGGTGGTTGTTTTCCTCAAGAGATTGGTTTGTTAGGGGAAGTAACAGTTTTGGATGCTAGCAAAAATGGGTTTGTTGGGACACTACCAAACTTAGCAGGGTTGAAGAATGTTGAGGTTATTGACATAGCACATAACAAGTTTAGTGGTTATGTTTCCAACACTATTTGTCAACTACCTACTTTGAAGAACTTTACATTTTCTTATAATTACTTTAATGGAGAAGCACAAACTTGTGTTCCTTCAGATAGTTGTTCTGTTGAGTTGGATGATGCCAAGAATTGTTTACCTGGAAGGAAGAATCAAAAGACATCTAAACAATGTTTACCTGTTTTGACTAAACCTGTGGATTGTAGCAAGAACTGTGGTGGAGGAAAAGGAAAGAGTCATGATCCATTAGAGCCTAAACCAACTCCATCAAAATCTCACCCTCCTAAGGTGGAGACACCAAAGGCTAAGCCACCACCAACTCCAAAGGCTCAAGCACCACAAATTCCACCGACACTTCCACCGGTTAAGGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCATCACCACCGGTTAAGTATATTCCACCTATGTTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGATGTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTGTCACCACCACCATCACCACCGGTTAAGCACATTCCACCTATGCTACCACCAGTTGAAGATATCCCACCAACCGTTGCACCGGTGTTTTCACCACCCCCACCGGTTGAGCGTATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCGGTTGAGAAAATCCCACCCATGCTACCACCGGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCAGCTGCTCAAGTCAACTCACCACCACCACCAGTTCACTCTCCTCCACCACCCTCACCAGCCCATTCCCCACCTCCACCAGTCAATTCTCCACCACCACCAGTGTACTCCCCTCCCCCACCCCCGCCAGTCCACTCTCCCCCTCCACCAGTCCATTCACCACCACCTCCAGTTCATTCTCCACCCCCACCAGTCCATTCTCCACCACCACCAATTCATTCTCCTCCACCACCTCCGGTTTACTCTCCTCCACCACCAACTCACTCTCCACCCCCACCAATCCATTCACCACCACCTCCAGTTCATTCTCCACCCCCACCAGTTCATTCTCCACCACCTCCAGTTAACTCCCCACCCCCGCCAGTTCATTCTCCTCCTCCACCGGTCTCCTCACCACCACCACCACCACCACAGGTGCATTCTCCACCACCACCGGTCAACTCACCTCCACCACCAGTACACTCACCTCCTCCTACCCCCGTCAACTCACCTCCACCACCAGTATACTCACCTCCTCCTACCCCCGTCAACTCACCTCCACCACCAGTACACTCGCCTCCTCCTCCCCAGGTCAACTCACCACCATCACCAGTACACTCCCCTCCTCCACCGGTCAATTCACCATCACCACCAAAATGGGATGACATCACACTACCACCAAACATTGGAGCTGAATATAGGTCACCTCCTCCTCCAACAATTGCTGGATACTAA 2817 0.4675 MAHHYSNKVLGCFLLFSLTLTYGHSHFLIDPIIIPGYEVSPGHDIGDGDAPAQSPEPFVGDSPAQSPEPFMDDSPAPSPEKDSENVDKSFPNERLKHSYVAFQAWKKAIYSDPFNTTGNWVGHDVCSYNGVFCSPALDDPTLNVVAGVDINHADIAGHLPEELGLLNDTSLFHINSNRFCGIIPDSFENLTIMYEFDISNNRFVGDFPLVVLKWKNLTYLDIRFNDFEGVLPHELFEKELDAIFLNNNRFTSHIPETLGKSTASVVTFANNNFTGCIPKSIGNMVNLNEIVFLGNDLGGCFPQEIGLLGEVTVLDASKNGFVGTLPNLAGLKNVEVIDIAHNKFSGYVSNTICQLPTLKNFTFSYNYFNGEAQTCVPSDSCSVELDDAKNCLPGRKNQKTSKQCLPVLTKPVDCSKNCGGGKGKSHDPLEPKPTPSKSHPPKVETPKAKPPPTPKAQAPQIPPTLPPVKDIPPTVAPVSSPPPSPPVKYIPPMLPPVEDIPPTVAPVMSPPPPVERIPPMLPPVEDIPPTVAPVLSPPPSPPVKHIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVSSPPPVEKIPPMLPPVEDIPPTVAPVSSPPPAAQVNSPPPPVHSPPPPSPAHSPPPPVNSPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPPVYSPPPPTHSPPPPIHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPPPVSSPPPPPPQVHSPPPPVNSPPPPVHSPPPTPVNSPPPPVYSPPPTPVNSPPPPVHSPPPPQVNSPPSPVHSPPPPVNSPSPPKWDDITLPPNIGAEYRSPPPPTIAGY 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi666g00026 938 MobiDBLite consensus disorder prediction 434 483 - -
Vivi666g00026 938 MobiDBLite consensus disorder prediction 43 89 - -
Vivi666g00026 938 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 98 396 - -
Vivi666g00026 938 MobiDBLite consensus disorder prediction 75 89 - -
Vivi666g00026 938 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 575 - -
Vivi666g00026 938 MobiDBLite consensus disorder prediction 665 916 - -
Vivi666g00026 938 MobiDBLite consensus disorder prediction 665 938 - -
Vivi666g00026 938 SUPERFAMILY L domain-like 102 373 - -
Vivi666g00026 938 Gene3D Ribonuclease Inhibitor 98 396 IPR032675 -
Vivi666g00026 938 MobiDBLite consensus disorder prediction 416 483 - -
Vivi666g00026 938 PRINTS Proline rich extensin signature 440 452 - -
Vivi666g00026 938 PRINTS Proline rich extensin signature 526 542 - -
Vivi666g00026 938 PRINTS Proline rich extensin signature 459 475 - -
Vivi666g00026 938 PRINTS Proline rich extensin signature 501 522 - -
Vivi666g00026 938 PRINTS Proline rich extensin signature 554 571 - -
Vivi666g00026 938 PRINTS Proline rich extensin signature 484 496 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi666g00026 90 417 Trihelix Transcription Factor Family AT1G49490 68.693 1.42e-172 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi666g00026 - - vvo:131634815 1163.67