Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi662g00015 ATGCTTGAGATAGATATGTTATCCTCACCGCTTGATTCTTCAACTTTATATCTAAACACAAGCACTATTGTTGCACTTTGCGTATTCTTTGCACTCCTCTGTGCTTGCATCGTCATAGGCCACCTTCTCGAAGAGAATCGATGGGCCAATGAATCCATCACAGCCCTCCTTCTTGGTTTGTGTTCTGGAGTGGTGGTGTTGTTGGTGACCAAGTTTCGTAGTACCAAGATTCTAATATTCAATGAAGACTTGTTCTTTCTTTACTTGCTTCCACCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACGACTATTCTTCTGTTTGGTGTCCTTGGGACAGTTATTTCTTTCTGTCTCATATCTCTCGGTGCCTTTCTACTCTTTAACGGGATTGGCATAACTGACCTCAGCATAAAAGATCACCTAGCCATTGGGGCCATACTGTCAGCAACTGATTCTGTTTGTACATTACAGGTTCTTAGTCAAGATGAAACACCTTTTCTTTACAGCATTGTATTCGGCGAAGGAGTAGTAAATGACGCCACATCTATTGTTCTTTTCAATTCAGTCCAATCACTTAACTTCAGCAGTATCAATGCTATTACTGCCTTGAAATTGTTGGGGACCTTCCTTTACCTCTTTTGCACTAGTACTGCTCTCGGCGTAATTGTTGGCCTTGCAAGTGCTTATATTATTAAAACACTTTACTTTGGGAGGCACTCTACAGATCGTGAAGTTGCACTTATGATGTTAATGGCATATCTGTCATATATGATTGCCGAGCTTTTGAATCTCAGCGGAATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACATGGCACAATGTTACAGGAAACTCAAGGACAACAACCAAGCATTCCTTTGCAACTCTCTCGTTCATAGCGGAAACCTTTATATTTCTATATGTTGGCATGGATGCTCTAGACATTGACAAATGGAAAAAAAGCAAAGCCAGCATAGGAACTTCAGTTGCTGTCAGCTCAACTTTGATTTCATTAGTTTTGATTGGAAGAGCCGCATTTGTTTTCCCTATTGCAAACATTGCAAATTGCTTCAAAACAAGAGAGAGCACAAAAATTGAGTTTCGATCACAGTTTATAATATGGTGGGCAGGCTTAATGAGAGGGGCCGTGACCATCGCGTTGTCTTATAATCAGTTTTCAAAATCTGAGATAGCATCTGCTGAAGACTATGCATTAATGATCACGTCAACTATAATCCTCGTCTTATTCAGTACCGTGGTATTTGGTTCCATAACAAAGCCTTTGATTGAGGCTGTGAAGTTAAGGCATTCAAAACCACCCATTTCTGGTTCCACTGATAATCAAGAGGATCTGAGATTACTACTCCTCGAAAGCAATTGTTCCGTCAACCAAAGCAACAATCAGCCAAATCATAGACGAAGTACTCTGAGTTTGCTGATGCGTTATCCTACTACTACGGTTCACTACTTTTGGAGGAAATTCGATGATAAGTTTATGAGACCTGTATTTGGCGGTAGAGGTTTTGTTCCGGTTGCTCCTGGTTCACCGCCCGCTGAAGACGAGATTTCTTGA 1611 0.406 MLEIDMLSSPLDSSTLYLNTSTIVALCVFFALLCACIVIGHLLEENRWANESITALLLGLCSGVVVLLVTKFRSTKILIFNEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVLGTVISFCLISLGAFLLFNGIGITDLSIKDHLAIGAILSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQSLNFSSINAITALKLLGTFLYLFCTSTALGVIVGLASAYIIKTLYFGRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTGNSRTTTKHSFATLSFIAETFIFLYVGMDALDIDKWKKSKASIGTSVAVSSTLISLVLIGRAAFVFPIANIANCFKTRESTKIEFRSQFIIWWAGLMRGAVTIALSYNQFSKSEIASAEDYALMITSTIILVLFSTVVFGSITKPLIEAVKLRHSKPPISGSTDNQEDLRLLLLESNCSVNQSNNQPNHRRSTLSLLMRYPTTTVHYFWRKFDDKFMRPVFGGRGFVPVAPGSPPAEDEIS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi662g00015 536 NCBIfam sodium/hydrogen exchanger 3 26 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi662g00015 536 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi662g00015 536 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi662g00015 536 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi662g00015 536 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi662g00015 536 PANTHER SODIUM/HYDROGEN EXCHANGER 26 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vivi662g00015 536 Gene3D - 145 197 - -
Vivi662g00015 536 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi662g00015 11 529 Antiporters AT3G05030 61.985 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi662g00015 K14724 - qsa:O6P43_026859 803.897