Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi662g00010 ATGTGTTTACCTGAAAAGGAAATAGATAGAGCAAAAGACATGGCACTAGAAGCTGTGGTTTTTCCACAAACACAAGACCCTTTTGGTTATGGAATCAAAGACTTTTACAACTTCAACTTCAACAACCTTGTTGCCAAAGAACAAGACCAACAACAAGAACAAGAACAAGAACAAGAACAAGAACAAAGATCTTTCTGTTTTGTAGAAAACCAAACAGAAAATAATTTTCCTTATTATGGAGATTGGAATAACAGTAGTGCTACTTTTTCACCACAGCATTTGAATGAAGTTCAAGAAACTACTACTGATCCGAGTAGTAACAACACTCAGAACTTGGATACTTCAACTTCCATTGACACTGTTGTTCGTCCGAAAAGGCGCAGAGCTAGAAGCAGAAAAAACAAAGAGGAAATTGAGAATCAAAGAATGACTCACATTGCTGTGGAGCGAAATAGAAGAAAGCTGATGAATGAGTATCTTTCGGTTCTTCGCTCTCTCATGCCAGATTCTTACATCCAAAGGGGTGATCAAGCTTCTATAATTGGAGGTGCTATCAACTTTGTAAAAGAGCTAGAACACAAGTTTCAATTTCTTGGTGCTATGAAAGAAAAGGAAGTGAAATCTGATTATGATGATGCTGGTGAATCAAGCAAAAAGCCATTTTCTGAGTTCTTTTCATTTCCACAGTATTCAACAAGTACTTCTAACTCTGCAGCAGTTTTTGGAGAAAAAGTTGGTGAGATTCAGTCTTGCATTGCTGACATAGAAGTAACAATGGTTGAAAGCCATGCAAATCTTAAAATAAGATCCAAAAAGAGACCAAAACAGCTCCTGAAAATGGTGTCTGGTTTTCATAACATGCGCCTCACAATCTTGCACTTGAATGTAACCACTTCTGGTGAATTTGTTCTCTTCTCTCTCAGTGTTAAGGTTGAAGATGATTGCAAGCTGGGATCAGTGGATGATATAGCTGCAGCTGTATACCAAATGGTGGATAGGATTCAACAAGAGGCAATGTTGAATTAA 1026 0.3752 MCLPEKEIDRAKDMALEAVVFPQTQDPFGYGIKDFYNFNFNNLVAKEQDQQQEQEQEQEQEQRSFCFVENQTENNFPYYGDWNNSSATFSPQHLNEVQETTTDPSSNNTQNLDTSTSIDTVVRPKRRRARSRKNKEEIENQRMTHIAVERNRRKLMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEHKFQFLGAMKEKEVKSDYDDAGESSKKPFSEFFSFPQYSTSTSNSAAVFGEKVGEIQSCIADIEVTMVESHANLKIRSKKRPKQLLKMVSGFHNMRLTILHLNVTTSGEFVLFSLSVKVEDDCKLGSVDDIAAAVYQMVDRIQQEAMLN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi662g00010 341 SMART finulus 146 197 IPR011598 GO:0046983
Vivi662g00010 341 PANTHER MAX DIMERIZATION, MAD 47 338 - -
Vivi662g00010 341 Gene3D - 126 207 IPR036638 GO:0046983
Vivi662g00010 341 MobiDBLite consensus disorder prediction 94 115 - -
Vivi662g00010 341 Coils Coil 40 64 - -
Vivi662g00010 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 191 IPR011598 GO:0046983
Vivi662g00010 341 Pfam Helix-loop-helix DNA-binding domain 141 192 IPR011598 GO:0046983
Vivi662g00010 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 203 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi662g00010 14 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.729 1.16e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi662g00010 HLH 9.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi662g00010 - - pvu:PHAVU_007G181900g 417.157