Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi662g00004 ATGGAAGTTAATAATACAACTACTATTGTACCTTCAGGGCCACCTATTGTTTCTACAAAGAACCATACTTTCATACACCATTTCCATCACTTACATTCAGATAAAAATTACCATAGCCATGCTCGCCATTTTCCCTTCAAAACTGTTCTCTTAATTGTCACATTGGTTGCCTTAATTATGCTCTTCTTTACCATTTTCATGGTTGTGTGCTTGATCCGTCGCCAAAAATCTTCAAGCAAAAATGGGATTTACAAAGAGGATTGTGAGAGTAGAGTGCTTCATGACACAAGTAGCAGACACATAGCTTCAACAATCCTGTCCTTTGATTCTAGCCCGGATGTTAAAGGTGGGTGTCTTTATGGGGGAAATCTGAGCAGGACACCAACAACACCTAAATTTAAAGGAGTGCAAGTTTTCACGTATAGAGAGCTAGAAGCTGCTACAGGTGGATTCAATGAAGCAAATGTGATTGGTAATGGAGTAAATGGTTTGATGTATAAAGGAGTCTTAACTGATGGAACTTTGGCAGCAATTAAGTTGCTGCACATTGAGGGTAAGCAAGCAGAGCGTGGCTTCAAAATAGAGGTCGATCTTCTAAGCCAATTGCGTTCTCCTTATTTGGTGGAGTTGCTTGGCTATTGTGCAGACCAACACCACAGGTTATTGATTTTTGAATACATGCCAAATGGTACACTCCAAAACCATCTTCACTCAACCAATGATAAAACTCAGCCATTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCTAGGGCCTTGGAGTTCTTGCATGAATATGCTGTATCACCCGTGATCCATAGAGACTTCAAGACTTACAATGTTTTACTGGATCAAAACTTTCGTGCAAAGGTGGCAGATTTTGGATTGGCTAAGATGGGATCAGAAAAGAGAAATGGCCAGGTTTCTACCCGTGTGTTGGGGACCACAGGATATTTGGCACCAGAGTACGCCTCCACAGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTACGGGGTAGTTCTTCTCGAATTGCTGACAGGACGTGTACCGGTTGATATTAAGCGCCCCACTGGAGAACATGTTCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAGTTCTACACGGGCAATACTCAAAGAAGGCATTAGTTCAGGTAGCTGCAATCGCAGCAATGTGCATACAACCAGAAGCTGATTACAGGCCACTAATGACAGATGTGGTACAATCATTGATACCACTTGTGAGGACACAATCTCTTTCCAGTTCACTAAGATTTCATAAACAAATACCAATTTATTAA 1341 0.4191 MEVNNTTTIVPSGPPIVSTKNHTFIHHFHHLHSDKNYHSHARHFPFKTVLLIVTLVALIMLFFTIFMVVCLIRRQKSSSKNGIYKEDCESRVLHDTSSRHIASTILSFDSSPDVKGGCLYGGNLSRTPTTPKFKGVQVFTYRELEAATGGFNEANVIGNGVNGLMYKGVLTDGTLAAIKLLHIEGKQAERGFKIEVDLLSQLRSPYLVELLGYCADQHHRLLIFEYMPNGTLQNHLHSTNDKTQPLDWWARMRIALDCARALEFLHEYAVSPVIHRDFKTYNVLLDQNFRAKVADFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPVLHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRTQSLSSSLRFHKQIPIY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi662g00004 446 SUPERFAMILY Protein kinase-like (PK-like) 128 424 IPR011009 -
Vivi662g00004 446 PANTHER OS07G0668900 PROTEIN 130 432 - -
Vivi662g00004 446 CDD STKc_IRAK 157 427 - -
Vivi662g00004 446 Gene3D Phosphorylase Kinase; domain 1 124 226 - -
Vivi662g00004 446 Gene3D Transferase(Phosphotransferase) domain 1 227 441 - -
Vivi662g00004 446 Pfam Protein tyrosine and serine/threonine kinase 155 424 IPR001245 GO:0004672|GO:0006468
Vivi662g00004 446 FunFam Receptor-like serine/threonine-protein kinase ALE2 227 441 - -
Vivi662g00004 446 ProSiteProfiles Protein kinase domain profile. 151 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi662g00004 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi662g00004 31 437 Receptor kinase-like Gene Family AT3G58690 53.995 1.85e-148 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi662g00004 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi662g00004 - - gmx:100499645 642.499