Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi661g00006 ATGTGTGTTCAAGGTGATTCTGGCCTTGTCCTCACCACTGATCCAAAGCCACGGCTTCGTTGGACTGTCGAACTCCATGAACGCTTCATCGATGTTGTTGCTCCGCTTGGAGGACCAGATAGTACTCATCTTTTCCTTATGTTCTTTTATTTCATGTGGTGCAAATTATATATGTCGAACTCCATGAACCCCTGTTCTTTTAAATTGTCTTTAATTCTACTTTTTCTAACAATACAATTAGCAGTTTGTATCTATGTTTTATTAAATGGAGGAATTTGGAATAAGGCTAGTATTATTGATTTTGATTTGCTTTTGTTCACTTTATGCAAAAAGAAACATGTCATGCAGGCTCAAAAGTTTTTCGATCAAATCAAGAGCCGGTTCTCGTTAACAGCTAAAACATACAGCATTCTGATTTCTGGATGGGGTAAGGTTGGTGATTCAGGGAAGGCCCGTGAGCTGTTTGAAGAAATGCTTGAGCAAGGATGTGACGTGGATTTGCTTGCTTATAATAATATGTTAGATGCCCTTTGTAAGGGAGGCCATGTGGATAAAGCTATGGATTTTTTTAACGATGTGTTGTCAAAGAGTGTTGGGCCAGATGCGTTTACTTACTCGATATTCATTCGTGCATACTGTGACGCAGATAATTTTACTTTGGCATTGAAATGCAACTGCACTGAGAAAAAAATACATGTGGATCAAATATTGGAAGTGCTTAATTTTTATCTGTGGCAGGTTCAAAAGCATTTTCAATTGAGGATTGAGGCTCAAGGAAAGTACATGCAGAGTATATTAGAGAAAGCTTATCACACACTTGCTGGAGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGAATAAATGGTAGTGATGAGGAACAGTTCGAGAGACCAACCCTTGAAGGATTTATGCCAACTAATAATAATAAGACCTTAATCATTTGCCACATCAGCCTTTCAGTCAAAGCCCAGTCAGCATGTGGAGTAAAAGGGTGTGGTAAATTTGGCATTACACTTTTATAG 1026 0.386 MCVQGDSGLVLTTDPKPRLRWTVELHERFIDVVAPLGGPDSTHLFLMFFYFMWCKLYMSNSMNPCSFKLSLILLFLTIQLAVCIYVLLNGGIWNKASIIDFDLLLFTLCKKKHVMQAQKFFDQIKSRFSLTAKTYSILISGWGKVGDSGKARELFEEMLEQGCDVDLLAYNNMLDALCKGGHVDKAMDFFNDVLSKSVGPDAFTYSIFIRAYCDADNFTLALKCNCTEKKIHVDQILEVLNFYLWQVQKHFQLRIEAQGKYMQSILEKAYHTLAGENMAAAATNFKGINGSDEEQFERPTLEGFMPTNNNKTLIICHISLSVKAQSACGVKGCGKFGITLL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi661g00006 341 Pfam MYB-CC type transfactor, LHEQLE motif 247 271 IPR025756 -
Vivi661g00006 341 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 131 165 IPR002885 -
Vivi661g00006 341 Pfam PPR repeat family 167 213 IPR002885 -
Vivi661g00006 341 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 95 223 - -
Vivi661g00006 341 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 166 200 IPR002885 -
Vivi661g00006 341 Gene3D Tetratricopeptide repeat domain 93 238 IPR011990 GO:0005515
Vivi661g00006 341 NCBIfam pentatricopeptide repeat 169 202 IPR002885 -
Vivi661g00006 341 NCBIfam pentatricopeptide repeat 134 166 IPR002885 -
Vivi661g00006 341 Pfam PPR repeat 134 163 IPR002885 -
Vivi661g00006 341 SUPERFAMILY HCP-like 112 224 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi661g00006 1 40 G2-like Transcription Factor Family AT1G79430 92.500 3.78e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi661g00006 - - vvo:131634737 688.337