Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi65g00007 ATGATGGAGCTACAAGCTATTTCGATAATAAGATTGGTTGCGGCGTGTGTTCTTTGTCTGTGTATATTAATCATATCAGGTTCTTCTGCAAGTGAAGGGTTTGAGAGCATAGCATGCTGTGCTAATTCAAATTACACAGATCCGAAAACCAATCTAAATTACACAACAGATTACAGGTGGTACTCGGACAAAAGTAATTGCAGACAAATACCAGAAATTTTGTTAAGCCACAGAAGCAATGTAAACTTTCGACTGTTTGATATAGATGAAGGAAAGAGGTGTTACAATTTGGCAACAGTTAAAGATCAAGTGTATCTGATAAGGGGGACGTTTCCATTTGATAGTGTAAATTCTTCGTTTTATGTTTCGATTGGGGCAACAGAACTAGGCGAAGTGACATCGTCTAGGCTCGAGGACTTGGAAATCGAGGGAGTTTTTAGAGCCATCAAAGACAATATAGACTTCTGCTTATTGAAGGAGGATGCCAATCCCTTCATTTCTCAAATTGAATTGAGACCATTACCTGAAGAATACCTGCATGATTTCTCTACCAGTGTTTTAAAACTGATAAGCAGAAATAATCTTTGTGGCATAGAAGACGACATCAGGTTCCCTGTTGACCAAAATGATAGAATCTGGAAAGCAACTTCAACTCCATCATATGCTGTTCCACTGTCTTTCAATGTCAGTGATGTTGACCTCAACGGCAAGGTGACACCTCCTCGACAAGTCCTACAAACAGCTCTTACTCACCCTGATCGATTGGTGTTCGTCCACGACGGCCTCGAGACCGATGATTATGAATACTCTGTGTTACTCTACTTTCTTGAACTAAATAACACTGTCAAAGCAGGACAAAGGGTGTTTGACATCTATCTAAACAGTGAGATTAAAAAGGAGAGTTTTGATGTATCGGAAGGAGGATCCAAGTACAGTTACATCACCTTGAACATTTCAGCAAATGGATCACTCAATATAACCTTAGCCAAGGCATCTGGATCTAAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGGCGCGACCATGGATCGATGAGACCGACCAAACAGATGTGGAAGTTATTCAGAAGATGAGAAAAGAACTGCTCCAGCAAAACCAAGACAATGAAGCATTGGAGAGTTGGAGTGGAGATCCTTGTATGCTTTTTCCCTGGAAAGGAGTAGCATGTGATGGTTCAAATGGTTCATCTGTCATCACAAAGCTGGATCTTTCCTCCAGTAACCTCAAAGGAACAATCCCTTCCAGTGTCACTGAGATGACCAAATTACAAATACTGAACCTGAGCCACAACCACTTCGATGGCTATATCCCCTCGTTTCCATCGTCTTCCTTGTTGATATCAGTAGATCTAAGCTACAATGACCTAACGGGACAGCTTCCAGAATCCATTATCTCACTGCCACATCTAAACTCACTATATTTTGGCTGCAATCAACACATGAGCGACGATGATGAAACCAAATTGAACAGTTCACTAATCAGTACAGATTATGGGAGATGCAAGGCAAAAAACCCCAAATTTGGACAAGTATTCATGATTGGAGCTATTACAAGTGGATCAATTTTGATTACTTTGGCTGTCGGAATTCTATTTTTTTGCCGTTATAGACACAAGTCAATTACTTTGGAAGGATTTGGTGGAAAGACCTACCCAATGGCAACAAATATAATTTTCTCCTTGCCAAGCAAAGACGATTTCTTCATAAAGTCTGTATCAGTTAAACCGTTCTCTTTGGAGTATATAGAGTTGGCAACAGAGAAGTACAAAACTTTGATAGGTGAAGGAGGATTTGGCTCTGTTTACCGGGGCACTCTAGACGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAGGGAACCCGAGAATTTGACAATGAGCTAAACCTACTTTCAGCTATACAACATGAGAATCTGGTGCCTCTTCTTGGTTACTGTAATGAATATGATCAACAAATTCTTGTGTATCCTTTCATGTCTAATGGATCTTTGCTAGATAGACTATACGGGGAACCGGCAAAGAGAAAAATACTAGACTGGCCAACTAGACTCTCTATTGCTCTAGGAGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCTGGACGGTCTGTAATACACAGGGACGTAAAATCGAGCAATATACTACTGGACCATAGCATGTGTGCTAAGGTCGCAGATTTTGGTTTCTCAAAATACGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTATCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAAAAGAGTGATGTTTTCAGTTTTGGCGTGGTTCTACTAGAAATTGTAAGTGGCCGGGAACCTCTCAACATAAAGAGACCACGAGTCGAGTGGAGCTTGGTTGAATGGGCTAAACCATACATAAGAGCATCAAAGGTGGATGAAATTGTAGATCCTGGCATCAAGGGAGGATATCATGCAGAGGCACTGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCCTACTCAACATATAGGCCATGCATGGTTGATATTGTCCGCGAGTTGGAAGATGCTCTCATAATCGAAAACAATGCATCTGAATACATGAAATCAATAGACAGTCTCGGAGGATCCAACCGCTACTCAATTGTCATGGACAAAAGGGCGCTTCCCTCAACTACAAGTACGGCAGAATCAACCATCACAGCTCAAAACGTGTCACACCCTCAACCGAGATAG 2775 0.4177 MMELQAISIIRLVAACVLCLCILIISGSSASEGFESIACCANSNYTDPKTNLNYTTDYRWYSDKSNCRQIPEILLSHRSNVNFRLFDIDEGKRCYNLATVKDQVYLIRGTFPFDSVNSSFYVSIGATELGEVTSSRLEDLEIEGVFRAIKDNIDFCLLKEDANPFISQIELRPLPEEYLHDFSTSVLKLISRNNLCGIEDDIRFPVDQNDRIWKATSTPSYAVPLSFNVSDVDLNGKVTPPRQVLQTALTHPDRLVFVHDGLETDDYEYSVLLYFLELNNTVKAGQRVFDIYLNSEIKKESFDVSEGGSKYSYITLNISANGSLNITLAKASGSKFGPLLNAYEILQARPWIDETDQTDVEVIQKMRKELLQQNQDNEALESWSGDPCMLFPWKGVACDGSNGSSVITKLDLSSSNLKGTIPSSVTEMTKLQILNLSHNHFDGYIPSFPSSSLLISVDLSYNDLTGQLPESIISLPHLNSLYFGCNQHMSDDDETKLNSSLISTDYGRCKAKNPKFGQVFMIGAITSGSILITLAVGILFFCRYRHKSITLEGFGGKTYPMATNIIFSLPSKDDFFIKSVSVKPFSLEYIELATEKYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMDKRALPSTTSTAESTITAQNVSHPQPR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi65g00007 924 Gene3D Phosphorylase Kinase; domain 1 567 670 - -
Vivi65g00007 924 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 671 887 - -
Vivi65g00007 924 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Vivi65g00007 924 Gene3D - 196 349 - -
Vivi65g00007 924 FunFam Nodulation receptor kinase 564 670 - -
Vivi65g00007 924 CDD STKc_IRAK 601 868 - -
Vivi65g00007 924 ProSiteProfiles Protein kinase domain profile. 595 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi65g00007 924 Pfam Protein tyrosine and serine/threonine kinase 598 867 IPR001245 GO:0004672|GO:0006468
Vivi65g00007 924 Pfam Malectin-like domain 41 346 IPR024788 -
Vivi65g00007 924 SMART serkin_6 595 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi65g00007 924 SUPERFAMILY Protein kinase-like (PK-like) 575 867 IPR011009 -
Vivi65g00007 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Vivi65g00007 924 Gene3D Transferase(Phosphotransferase) domain 1 671 884 - -
Vivi65g00007 924 PANTHER OS07G0107800 PROTEIN-RELATED 36 871 - -
Vivi65g00007 924 SUPERFAMILY L domain-like 378 493 - -
Vivi65g00007 924 Gene3D Ribonuclease Inhibitor 357 513 IPR032675 -
Vivi65g00007 924 Pfam Leucine rich repeat N-terminal domain 357 399 IPR013210 -
Vivi65g00007 924 FunFam Leucine-rich repeat receptor-like kinase 359 492 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi65g00007 12 874 Receptor kinase-like Gene Family AT1G67720 34.739 1.49e-135 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi65g00007 Malectin_like 1.8e-44 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi65g00007 - - gmx:100781986 1426.38