Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi659g00003 ATGGGTAACGGAATAGGAAAACTAACGGTGTGTTTCACGGGAAGCGATAAGGGTCGGAAACACGATATATCAATTCTAATAACTGACCCGTTAGACGAAGGACTCGGTCACTCTTTCTGTTACGTTAGACCCGACCCGACCCGGTTATCGAGTTCGAAGGTTCATTCTGAAGAAACGACGACGTTTAGAACTATCTCCGGGGCTTCTGTTAGTGCTAACACGTCGACGCCGTTATCGACGGCGTTTATGGATTTATACTCTTACGGTTGTTTCGATAGAGCTGCGGCGTTTGAGAGTTCTACTTCTTTTGCTTCTCTTCCGTTGCAACCGATTCCGAAGAGTCTGATGGGGACCGGTTCGGGTCCTTTTTCGAGTAATTTTGGAGGTGGTGGTTTTCCCGGTTCCGGTCCGCTTGAGCGTGGGTTCATGTCCGGTCCGATTGAGAGGGGGTTCATGTCCGGTCCGATTGATCGTGGTTTATTTTCCGGTCCGATTGAAAAGGATAACTCCGATCAGGGTTTTCCGAGAAGCTTCTCTCATAGTGGATTAGGGGTTTCGGTTAGACCTAGAACGAGGAAGGAAAAATGGATTCGTGTTCTTCAGAGAGCGATTTCGAAGACTCTGTCGCGTGGACAGAGCTCGATTGTTACTCCGATCAAAGGTGTGCCGGTGAAGGAGCCGCCGGAGTGGATCCTTGCTGGGGAGAAGCATAACGAGAATTTGACGGTGAGTAGTTTGAATTTGAGTAGTGAAGGTAGTTTGGAAGATGATGATTCGATGGGGAGTCAGAATCTGCAATGGGCTCAGGGGAAAGCTGGGGAGGATCGTGTTCATGTTGTTGTTTCTGAAGAGCATGGTTGGGTTTTTGTTGGGATTTATGATGGTTTCAATGGTCCTGATGCGCCGGATTATTTACTTTCGAATCTTTATAGTTTTGTTCACAAGGAGCTTAAAGGGTTGCTTTGGGATGATGGGGTTTCGGCGGATAATTTGAATTTGAAAGCGCGCGATTCGGTTGATGATGTTGATGTTGTTGAAGGGAAAGAAGCTAAGGTGTTTGATGATTGTTCTCAATGTGTTGGTCAAGAGAAAGGGGATTTGGTTTCGAAGAAAAAAAAGAGAGGGAAGAATTCGAAGAATAAGTACAAAGATGCAGCGATGAAACACGAAGAAAATCATAGGAGATGGAAATGTGAATGGGATAGGGAGAGACTAGAGCTTGATAGAAGATTGAAGGAGCAACTTAGTGGTGACGACAGTGACAACAATTCTGTTAATCATTCAGATGTTTTGGAGGCTCTATCTCGAGCGTTGAGGAAAACCGAGGAGTCTTATCTTGATGTTGCTGATAAGATGGTGATGGAGAATCCAGAACTTGCTTTGATGGGTTCTTGTGTTCTTGTAATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGAGATAGTAGAGCTGTGTTGGCGCAAAAGGCTGAACCTGATTATTGGATTGGGAAAATTAGACAGGATTTGGAGAGGATTAATGAAGAGACAATGCATGATCTTGAATCATGGGAGGATGCTGATAAATCAAATTCTATTCCTAGTTTAAGTGCTCTTCAGCTTACCAAAGATCATAGTACCAATGTTGAAGAGGAAGTAGTCAGAATAAGAAAAGAGCACCCCGATGATCCTTGTGCTGTAGTCAATGAACGTGTTAAGGGATCTCTCAAGGTTACTCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAATGGAACAATGCACTTCTCGAGATGTTTAGAATCGACTACGTAGGAAATTCTCCATACATCACTTGCCTACCATATCTTAAACACCACAGATTAGGCCAAAAAGACAAGTTCTTGATTCTATGCTCCGACGGTCTCTATCAATACTTATCAAACGAAGAAGCAGTAGCTGAAGTTGAACTTTTCATCACATTGCAACCTGAAGGAGACCCTGCTCAACATTTGGTTGAAGAAGTCTTGTTTCGTGCCGCAAAGAAAGCAGGTTTGGACTTTCACGAATTGCTCGAGATCCCACAAGGCGATAGGCGACGTTACCACGACGATGTCTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2133 0.4416 MGNGIGKLTVCFTGSDKGRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKSLMGTGSGPFSSNFGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEKDNSDQGFPRSFSHSGLGVSVRPRTRKEKWIRVLQRAISKTLSRGQSSIVTPIKGVPVKEPPEWILAGEKHNENLTVSSLNLSSEGSLEDDDSMGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDDGVSADNLNLKARDSVDDVDVVEGKEAKVFDDCSQCVGQEKGDLVSKKKKRGKNSKNKYKDAAMKHEENHRRWKCEWDRERLELDRRLKEQLSGDDSDNNSVNHSDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWEDADKSNSIPSLSALQLTKDHSTNVEEEVVRIRKEHPDDPCAVVNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCLPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi659g00003 710 Pfam Protein phosphatase 2C 415 657 IPR001932 -
Vivi659g00003 710 SUPERFAMILY PP2C-like 271 702 IPR036457 -
Vivi659g00003 710 CDD PP2Cc 407 701 IPR001932 -
Vivi659g00003 710 ProSiteProfiles PPM-type phosphatase domain profile. 257 701 IPR001932 -
Vivi659g00003 710 SMART PP2C_4 258 699 IPR001932 -
Vivi659g00003 710 Coils Coil 502 522 - -
Vivi659g00003 710 PANTHER PROTEIN PHOSPHATASE 2C 256 699 IPR015655 GO:0004722|GO:0006470
Vivi659g00003 710 Gene3D - 238 706 IPR036457 -
Vivi659g00003 710 FunFam probable protein phosphatase 2C 4 232 706 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi659g00003 1 710 PP2C-type Phosphatase Gene Family AT1G07630 68.465 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi659g00003 - - pvu:PHAVU_011G064200g 1100.12