Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi657g00002 ATGTCAACTCCTTCATCATCTTCATCTTCTATTTGGATTCTATCTAACATGAAACTTCAATTCTTCACTCGAATCAAACGTTTTCTCCAATCCAAAGCAACTCGAAAACGCTGCGACGCCTCCGATCAGTCCAACAAAGAAAAAACCAGAACAGAACAAAACAAAGTTGAAATAATTTCAACAGTTCAAGTTGTGGAGAAGCATAAGGAGGAGGTGGAGGTGGAGGTGGTGGAGGAAACTGAAATTCTACTACAAAAGACAGTGAAAATGCTTCACTTTGGAAGCTGGGAAGAGAAAGAGATAGCTGCAAAAGAGATTGAGAGTTTAGTTAAACAAGATGTCAAAGTTAGAAAGTTGATAACAGAACTTGGAGTGGTGCCGGTTTTGGTATCCATGGTGGCGTCGACAGTGGTTAGTCGCCGGAGAGCAGGGTTGACAGCGTTGATCTACCTTGCTGACGGAACTTACACGAACAAAGCTATGATAGTGGAGGCAGGAATATTATCCAAACTACCTAAGACAATTGACCTTATAGATAACTCTACCATGAATGAGTTTGCAGAGTTAGTTCTATCATTATCATCACTTGCAAACACACAATTCCCTTTTCCTTCATTAGATTTTCTACCATTTCTCAAAGACATTCTTAAAAAAGACACAAATTTTGACACCAAAAGATCATGTTTAGGAGCCTTATACAACATATCAACAATGTTAGAGAATGCAAGCACTTTGGTTTCTTATGATATTGTCCCAATTTTATTGGAACTTTCCTTAGTGAAAGAAATTTCGGAAAAAGCACTTGCTACTTTAGGTAACTTGTTGGTTACTCTAATGGGAAAAAAGGCGATTGAGGAAAGCTCAATGGTGCCACAAAATTTTGTCGAGGTTTTGTCGTGGGAAGACAAACCGAAATGTCAAGAGTTATCGGTTTATATTTTGATGATTTTAGCACATCAAAGTTTGGATCAAAGAGAGAAAATGGCACAAGCTAGGGTTGTTCCTATGCTTCTTGAAGTTGTTTTGTTGGGGAGTCCTTTAGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGAATGAGAGACAAGTTAAGATGGGGCCACATTCTGGTCCTCAAACACCAAGATTTGCAATGGGATCACCTTTGAATCAAAGAGATAGTAAAGAAGGGAAGAATTTGATGAAGAGTTTGGTGAAACAAAGTTTGCATAAGAATTTGGAA 1227 0.3822 MSTPSSSSSSIWILSNMKLQFFTRIKRFLQSKATRKRCDASDQSNKEKTRTEQNKVEIISTVQVVEKHKEEVEVEVVEETEILLQKTVKMLHFGSWEEKEIAAKEIESLVKQDVKVRKLITELGVVPVLVSMVASTVVSRRRAGLTALIYLADGTYTNKAMIVEAGILSKLPKTIDLIDNSTMNEFAELVLSLSSLANTQFPFPSLDFLPFLKDILKKDTNFDTKRSCLGALYNISTMLENASTLVSYDIVPILLELSLVKEISEKALATLGNLLVTLMGKKAIEESSMVPQNFVEVLSWEDKPKCQELSVYILMILAHQSLDQREKMAQARVVPMLLEVVLLGSPLAQKRAMKLLQWFKNERQVKMGPHSGPQTPRFAMGSPLNQRDSKEGKNLMKSLVKQSLHKNLE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi657g00002 409 Gene3D - 46 369 IPR011989 -
Vivi657g00002 409 SUPERFAMILY ARM repeat 86 358 IPR016024 -
Vivi657g00002 409 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 409 - -
Vivi657g00002 409 SMART arm_5 155 237 IPR000225 GO:0005515
Vivi657g00002 409 SMART arm_5 238 276 IPR000225 GO:0005515
Vivi657g00002 409 SMART arm_5 113 153 IPR000225 GO:0005515
Vivi657g00002 409 MobiDBLite consensus disorder prediction 366 390 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi657g00002 97 389 U-box Gene Family AT1G67530 28.758 5.11e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi657g00002 - - gmx:100813828 570.466