Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi653g00012 ATGCAACAATACATCCTCAGAAAAATATATAGCTTCAAGTATATCCTTCCCATATTTCTCATAATCCTATTCCATATGGCTTTTGCAGAAGAAACCTTAAACCTTCAAATGAAAAATTTTGTGCTTGTAAAACCATCAAAGTCCACTCCTTCTTGTATTCTTTCTCTTTCTACAATTGACAATAGAGATATCTATAATAACCTTTGTCAAACTGTTCATGTATACCGATCATCACCAACTCATGATTCCAGTTTTGACATTTTTCATGTATTCAAAGAAGCTCTTTCAAAGGTTTTGTTTTATTATTATCCTCTTGCAGGTAAACTAGTGGAATCAGCTGATGATGGAAAGCGTAAAGTCCATTGTAACCCTAATGCAAAAAATTACGGTGTTCCGTTCTTGGAAGCAACTGCTAATTGCACCCTTTCCTCTCTTCATTATTTGGATAATACTGACTTAGAAATTGCTAAATATTTGGTGTTTGATCCTCAAGATAAAAGTTACCCTTTGGTGTTCAAGGTAACAAGATTTCTTTGCGGTGGCTTCACAATTGGAATGGGAGTGTTGCATGCAGTGTGTGATGGATTTGGTGCATCTCAATTCTTGAAATCAATTGTTGAACTTTCAAGGGGAAGAACCGAGCCCTCTGGGATACCTGTGTGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCAAAAAGTCCCATGAACAATATTGCATTTTCACCTTTTATAGATGAAACCAGTAATATAGTTATTAAGAAATATTGTTTTAAAGTGGAGGGTGAAATGATAAGAAATCTAAAGTTGAGTTTGATGAAGGAAAATGAAAATCTAGGGTTCACAACTTTTGAATCACTAGCTGGTTTTGTGTGGAGGTCAAGAGCAAGAGCTTTAAAACTTAACAACAACGGGGAAACAATGTTATCTTTGCTAGTCGGTATGAGACGCAACTTGAAGGATTTTGAACCCTTACCTAAAGGATATTATGGTAACTCTTGTGTGGATGCAAACCTTGTGATGAAAGTGAACGAGCTCAATGAAAGGCCACTCCATGAAATTGTTAAGCTCATCAAAGAGACTAAAAATGTTGCTTCTACTAGCGAGTATGTCAAAAACTCGATCGACTCTTGGGAGAATCATAAGGAGAATTTGAAAATGAAAAGTGGTGGAGCAGTAACAGTTTTGACAGAGTGGAGGCATTTGGGTTTTCTTAGTGAAAGTGTAGAACTTGGTGGGAATGAAGTGGTGAATGTAGTACCAGCACCATGCAACTTGTTTGCGAGTTTGGATATGAGCATTTTTACGTCTTCTAATAAAATTGATGATGAGAATGATCCATTGATGAAAGGAGGAGTTAATCTTTTCACATCACTCCCGGTTGATGCCATGCCTAGGTTTAAAGAGGAAATTGAGTCATTAAGATTTATTAGTTGA 1449 0.3637 MQQYILRKIYSFKYILPIFLIILFHMAFAEETLNLQMKNFVLVKPSKSTPSCILSLSTIDNRDIYNNLCQTVHVYRSSPTHDSSFDIFHVFKEALSKVLFYYYPLAGKLVESADDGKRKVHCNPNAKNYGVPFLEATANCTLSSLHYLDNTDLEIAKYLVFDPQDKSYPLVFKVTRFLCGGFTIGMGVLHAVCDGFGASQFLKSIVELSRGRTEPSGIPVWERERLVGSITKQPFPKSPMNNIAFSPFIDETSNIVIKKYCFKVEGEMIRNLKLSLMKENENLGFTTFESLAGFVWRSRARALKLNNNGETMLSLLVGMRRNLKDFEPLPKGYYGNSCVDANLVMKVNELNERPLHEIVKLIKETKNVASTSEYVKNSIDSWENHKENLKMKSGGAVTVLTEWRHLGFLSESVELGGNEVVNVVPAPCNLFASLDMSIFTSSNKIDDENDPLMKGGVNLFTSLPVDAMPRFKEEIESLRFIS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi653g00012 482 PANTHER ACYL TRANSFERASE 4 35 476 - -
Vivi653g00012 482 Pfam Transferase family 41 477 - -
Vivi653g00012 482 Gene3D - 251 475 IPR023213 -
Vivi653g00012 482 Gene3D - 31 239 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi653g00012 33 387 Monolignol Biosynthesis Gene Families AT5G48930 27.869 1.10e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi653g00012 K20240 - gmx:100801843 412.535