Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi651g00009 ATGATGATTATGACAAAATATCTTGCCAAGGGAGATCTTCGAGATTTCATGAAAAGAAAAGGAGCTTTAAAACCAAGTACAGCGGTTAGATTTGCACTTGATATTGCTAGGGGAGCGGGTTATTTGCATGAAAATAAACCATCACCCATTATTCACCGTGATCTAGAGCCTTCTAATATATTGCGGGATGATTTCAGCGACCTAAAAGTTGCAGAGTTTGGAGTGAGCAAGTTGCTAATAGTTAAAGATAAGCCTCTAACTTGTGAAGATACTTCTTCTAAGCTATTTGGTGGTGTGATGAGGTCTCTCCTCTGCACCTCCATTTCAACCTTGGGTTGTCCGACGCTGTTACTCCAGCTTTTCTTCGGTGTTTTTTGGCGACGGTTTGGTTTCGGCAAAGATTACTCCAGGCGGATCGGCAACCGGCTGCTTCAGATCTGGAGTTGTGTGTTTTCTTCGTTGGTTGCTCCGACTTTTTGCAGGCCGCAATGTGGCTCCTGA 501 0.4391 MMIMTKYLAKGDLRDFMKRKGALKPSTAVRFALDIARGAGYLHENKPSPIIHRDLEPSNILRDDFSDLKVAEFGVSKLLIVKDKPLTCEDTSSKLFGGVMRSLLCTSISTLGCPTLLLQLFFGVFWRRFGFGKDYSRRIGNRLLQIWSCVFSSLVAPTFCRPQCGS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi651g00009 166 SUPERFAMILY Protein kinase-like (PK-like) 2 84 IPR011009 -
Vivi651g00009 166 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Vivi651g00009 166 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 86 - -
Vivi651g00009 166 Pfam Protein tyrosine and serine/threonine kinase 1 84 IPR001245 GO:0004672|GO:0006468
Vivi651g00009 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi651g00009 1 97 MAP Kinase Kinase Kinase AT4G18950 69.388 4.42e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vivi651g00009 PK_Tyr_Ser-Thr 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi651g00009 - - vvo:131634625 334.339