LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi650g00006	ATGGCCACCAACCAAGGTGTCCTTTCATCTCTTGACAATGCCAAAACACAAAGCTACCATTACATGGCAATAGTGATAGCAGGAATGGGATTTTTCACCGACGCGTACGATCTCTTCTGCATCACGGCCGTTACAAAGCTTATCGGTCGTCTGTACTACTTCGATCCGACTGGTCAGGGTCCCGGAAAGCTTCCAACAAACGTAAACAACGCAATAACCGGTGTCGCGTTATGCGGCACCCTCGCAGGGCAACTCTTCTTTGGCTGGCTTGGAGACAAACTTGGTAGAAAAAAAGTTTACGGCATAACGCTAACCACAATGGTTGGTTTTGCTTTAGCTTCAGGTCTTTCGTTTGGTTCCACGTCGAAAACCGTGGTTACTAGTCTTTGTTTCTTTAGATTCTGGCTAGGATTCGGCATTGGTGGAGACTATCCACTCTCTGCAGTGATCATGTCGGAGTATGCGAATCAGAAAACAAGAGGCAGTTTTATTGCTGCTGTTTTCGCTATGCAAGGTGTTGGAATATTGGTTGCAGGAGGCGTAGCCATGTTCGTCTCGAAAATATTCTTATCGGCTTTTCCAGCTCCTGATTTCGAAACTGATCCTGTTCTATCTACTCAACCAGAAGGAGATTTTGTATGGAGAATTGTACTCATGTTTGGTGCTGTTCCTGCTGCATTAACTTATTATTGGAGAATGAAAATGCCAGAAACTGCAAGATACACTGCTTTGGTAGAAGGAAATCACAAAAAAGCCGCGGAAGATATGGCCAAAGTTCTTGATAAAAAAATACTTTTCGAAGAATCTAATACCAGAATCGCTAGCAGACCATCCGGTTCACGCTCGTATGGACTCTTCTCTTCCGAGTTTCTTAATCGACACGGCCTTCACCTCTTAGGAACAACTAGCACATGGTTTTTATTGGACATTGCATTCTATAGTCTTCAACTGACACAAAAAGATATTTATCCAGCAAGTGGACTTGTATACAAGGCCTCCAAAATGAATGCTATCGAGGAAGTGTTTCAGCTCTCTCGAGCGATGTTCGTGGTTGCCTTGCTCGCCACGGTACCTGGATACTGGTGCACGGTTTTCCTAATCGACAAGATCGGACGGTACAGAATCCAGCTTGTTGGATTTCTTGTAATGTCAGTTTGTATGTGGTTTCTAGGACACAGTTATAGATCATACAGAGGAGAAGAATCTTCATGCAAGAAAGAATCAAAATACGAATATTGCAATGGAAACCTAATCATGTTTGCTATACTTTTTGGACTTACACTCTTCTTTGCGAACTTTGGACCTAATAGTACTACATTTATAGTCCCGGCCGAGCTCTTCCCTGCGAGGCTCCGTTCGACGTGCCATGGAATATCGGCTGCAGCGGGAAAATCGGGAGCTATCATCGGTGCTTTTGTGGTGCAAAGCCATATAGATAATGCACATGATAAAACAAAAGGGATCAAGCAGGCTATTATGGCGCTTTCGTTTGTAAACTTGCTTGGATTCTTTTGCACTTTCTTGGTGCCTGAAACGCAAGGTCGATCGCTCGAAGAAATATCGGGAGAGGAGAAAGAGTTTCAAGAAAATAATGCTGAAGATGAGACAATAAATGATGAAAAAAAGGGAATCAGAATCACTAGTGTTGATAAATCTCCAGGAACTTCAATAGTTTAG	1677	0.4317	MATNQGVLSSLDNAKTQSYHYMAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYFDPTGQGPGKLPTNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLTTMVGFALASGLSFGSTSKTVVTSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGSFIAAVFAMQGVGILVAGGVAMFVSKIFLSAFPAPDFETDPVLSTQPEGDFVWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNHKKAAEDMAKVLDKKILFEESNTRIASRPSGSRSYGLFSSEFLNRHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPASGLVYKASKMNAIEEVFQLSRAMFVVALLATVPGYWCTVFLIDKIGRYRIQLVGFLVMSVCMWFLGHSYRSYRGEESSCKKESKYEYCNGNLIMFAILFGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKSGAIIGAFVVQSHIDNAHDKTKGIKQAIMALSFVNLLGFFCTFLVPETQGRSLEEISGEEKEFQENNAEDETINDEKKGIRITSVDKSPGTSIV	558

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi650g00006	558	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	513	IPR020846	GO:0022857
	Vivi650g00006	558	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	21	519	-	-
	Vivi650g00006	558	MobiDBLite	consensus disorder prediction	522	558	-	-
	Vivi650g00006	558	SUPERFAMILY	MFS general substrate transporter	12	522	IPR036259	-
	Vivi650g00006	558	CDD	MFS_PhT	24	512	-	-
	Vivi650g00006	558	MobiDBLite	consensus disorder prediction	522	547	-	-
	Vivi650g00006	558	FunFam	Inorganic phosphate transporter 1-6	19	536	-	-
	Vivi650g00006	558	Gene3D	MFS general substrate transporter like domains	271	538	IPR036259	-
	Vivi650g00006	558	Gene3D	MFS general substrate transporter like domains	20	262	IPR036259	-
	Vivi650g00006	558	Pfam	Sugar (and other) transporter	24	521	IPR005828	GO:0016020\|GO:0022857\|GO:0055085

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi650g00006	1	525	Inorganic Solute Cotransporters	AT5G43360	62.056	0.0	656

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi650g00006	K08176		-	gmx:100820250	884.789