Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi64g00015 ATGCCTACCCAGAGATGGTTTAATACCAATTCCGAAAGAAATCAATCAGTTCGAAATATCCGAAATGTCTTGCCAGGTTATGCTTATGCCCAAGACAACCACTTTATTCACCATGAAAACATCAACCAGGTTCCAATAAGATGGTTTGATTCCAATCTTGAGAGACGTCAATTTGGGAGGAGTATCCGAAATGTGTTGCCAACTTATGCTGATGTCCAAGACAACCACTTTATTTTTCAAGAAAACAACATCAACCAAGTTCCAATAAGAAGAGAAATAATACCGACCCATAGATGGTCTGGCACCAATAGAGAGACAAATCAACATAGGTTGAACACTCAAGATGACTTTTTAGTGAATGCTTATGGCCAAGTTGACCACTATATTCTTCAGGAAAACAACATCAACCAAGCTCCAGTAAGAAGAGGCATTATACCTACCCAGAGAAGGAATAACACCAATTTAGAGAGAAACCAACCTAGGCTGAGTACTCGAGATGCATTGTCAGCTGAAGCTAATGTTCAAGATGATCGCTTTATTTTTGACGTAAGAAACATCAATCAAACTCAATCCGGAAGAGATGTTGAAGTTTCTAAGAGACATCATCATACCAATCTTAAGATAATTCAAGTTGAAGAAGGAACAAAAGATTCTGAAACCATGACATGTTCAATTTGCCTCGTAGAACTTTTAGTTGGATCGAGAGCTATCCAATTGCCTAGTCCATGTTTGCATGTCTATCATGACTATTGTATTCTTAAGTGGTTAGATATATCTAACACGTGTCCTTTGTGTCGTAGAAATGTTCGATGA 813 0.3801 MPTQRWFNTNSERNQSVRNIRNVLPGYAYAQDNHFIHHENINQVPIRWFDSNLERRQFGRSIRNVLPTYADVQDNHFIFQENNINQVPIRREIIPTHRWSGTNRETNQHRLNTQDDFLVNAYGQVDHYILQENNINQAPVRRGIIPTQRRNNTNLERNQPRLSTRDALSAEANVQDDRFIFDVRNINQTQSGRDVEVSKRHHHTNLKIIQVEEGTKDSETMTCSICLVELLVGSRAIQLPSPCLHVYHDYCILKWLDISNTCPLCRRNVR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi64g00015 270 SMART ringv_2 222 266 IPR011016 GO:0008270
Vivi64g00015 270 ProSiteProfiles Zinc finger RING-type profile. 223 266 IPR001841 -
Vivi64g00015 270 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 110 267 - -
Vivi64g00015 270 SUPERFAMILY RING/U-box 222 269 - -
Vivi64g00015 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 270 IPR013083 -
Vivi64g00015 270 SMART ring_2 223 265 IPR001841 -
Vivi64g00015 270 Pfam Ring finger domain 222 266 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi64g00015 219 266 C3H Transcription Factor Family AT4G12190 48.980 1.04e-10 55.1