Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi649g00002 ATGGAAATTGTTTCAGTTATGTATAAGGAAGAAGATCAAATGAATTTGCCACCTGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTATAAGTCATTATCTTTATAGAAAGGTAACTGACTTTAATTTTTCTTCTAGTGCTATTGGAGAGGTTGATTTGAACAAATTTGAGCCTTGGGATTTGCCATGGAAAGCAAAAATGGGTGAAAAGGAGTGGTATTTTTTCTGTGTGAGAGATAGAAAGTATCCAACAGGTTTGAGGACTAATAGAGCAACTGGAGGTGGATATTGGAAGGCAACTGGAAAAGATAAAGAGATTGACAGAGGAAAATCTCTTGTTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGAGAGAAAACAAATTGGGTCATGCATGAATATAGACTTGAGGGAAAATTATCTGTTATCAACCTCCCTAAAACTGCAAAGAATGAATGGATGATTTGTAGAATATTTCAGAAGAGTCTATCAGACAAAAAGACATGTGATCTTTCTTCTGGAATAATGAGGTTAGAATCTTTTCGAAATGAAATGAATTCTTCTATTCTTCCACCTTATTCCAATAACAAAATCGATTCGCCTTACGTGTCCTGCTTCTCCAATCCAATTGAAAGAAACCAAGTTACAACCTTTGATTCCTTTACCAACAACCCTTTTGAGGTTCCAAAAAACACACTTTCCATTGGTTCATTTTACTCTACTCAAGAACTTCAATCTACACCAAATTTTCCATTACCTGGTTGTTCTGTTTCAACTGCACCAATTGATCCATCTACATTGTGGAACTATTAA 828 0.3539 MEIVSVMYKEEDQMNLPPGFRFHPTDEELISHYLYRKVTDFNFSSSAIGEVDLNKFEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATGGGYWKATGKDKEIDRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKLSVINLPKTAKNEWMICRIFQKSLSDKKTCDLSSGIMRLESFRNEMNSSILPPYSNNKIDSPYVSCFSNPIERNQVTTFDSFTNNPFEVPKNTLSIGSFYSTQELQSTPNFPLPGCSVSTAPIDPSTLWNY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi649g00002 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 216 - -
Vivi649g00002 275 FunFam NAC domain-containing protein 100-like 25 170 - -
Vivi649g00002 275 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Vivi649g00002 275 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Vivi649g00002 275 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Vivi649g00002 275 SUPERFAMILY NAC domain 11 166 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi649g00002 14 228 NAC Transcription Factor Family AT5G07680 67.117 4.81e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi649g00002 NAM 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi649g00002 - - vvo:131634573 579.711