LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi648g00002	ATGGTGGAAGGCAACAACGAGATCATGGTCTCTCACACCACTACCACCACCAACAACAATGACACATTGGTGATGCCACCATCATCATCTTCACAACTGTCCTCTGATAGGTATATGGATCTCCGTCAAGATCCACCAAAGGTCATTCCCAAATCCTCCACCAAAAAACGAATGGGTAGACCTTTGGGCTCTAAGAACAGGCCCAAAGCACGCGTCATTGTCGAGGAAGACAAGGAAACCTTCACAGAAGTAGTTACACTTCAAATCCCACTTGGAGAAGATATTGTGGAGCATATAATCAAGTATGCTCAACAACGTCAAGCTAACATAATAGTGTCGAGGGGTTTCGGTCTTATTTCTAACATTACCTTTCTTGATCCAGTATCACGTGTCCCATTATTACCCATCGAAGGACCCGTGCATATGACATCTCTATTTGGAACATATATAAATCCAAATTGTGAATGTCCTCCTCGAAAATTCATAACTGATCCACCATGTTCCTCTTTTACCGTATATTTCTCTAGTCCTAATGGATATGTATTTGGTGGAATTGTTGGTGGAAAGGTTAAGGCTGCTGGTGTTATTTTGATTAATGCCACTCTTGTTTGGACAACTTTGTTCCACAGGGCAATCTCCTCCAATAGAAATGTTCGAGAAAATGAAGAGGGTGGACCAATATATGTTGATGGTGGCATCACTAATGTTAATCATGTAGCATATGAATCTGACAACAACAGTAATAACAACAATGTTTTTCATATGCCTACTAGCTTTAATGGTGTGGATGCTAATTCAACTCAATTGAATTATCAACTTCCCTCTCAATATCTTCCTATTGATGAGAACGTCATTGATGAGAACTTCATGCAGTGGAACCACTCCAATCACCCTCATTATTAG	903	0.4042	MVEGNNEIMVSHTTTTTNNNDTLVMPPSSSSQLSSDRYMDLRQDPPKVIPKSSTKKRMGRPLGSKNRPKARVIVEEDKETFTEVVTLQIPLGEDIVEHIIKYAQQRQANIIVSRGFGLISNITFLDPVSRVPLLPIEGPVHMTSLFGTYINPNCECPPRKFITDPPCSSFTVYFSSPNGYVFGGIVGGKVKAAGVILINATLVWTTLFHRAISSNRNVRENEEGGPIYVDGGITNVNHVAYESDNNSNNNNVFHMPTSFNGVDANSTQLNYQLPSQYLPIDENVIDENFMQWNHSNHPHY	300

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi648g00002	300	MobiDBLite	consensus disorder prediction	13	38	-	-
	Vivi648g00002	300	Gene3D	-	83	220	-	-
	Vivi648g00002	300	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	20	215	IPR014476	GO:0003680
	Vivi648g00002	300	SUPERFAMILY	AF0104/ALDC/Ptd012-like	83	217	-	-
	Vivi648g00002	300	Pfam	Plants and Prokaryotes Conserved (PCC) domain	84	198	IPR005175	-
	Vivi648g00002	300	MobiDBLite	consensus disorder prediction	13	67	-	-
	Vivi648g00002	300	ProSiteProfiles	PPC domain profile profile.	79	224	IPR005175	-

Showing 1 to 7 of 7 entries

Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi648g00002	55	210	AT-hook Motif Nuclear Localized (AHL) Family	AT5G49700	29.747	2.12e-18	81.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi648g00002	-		-	vvo:131613388	572.007

Showing 1 to 1 of 1 entries