Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi648g00002 ATGGTGGAAGGCAACAACGAGATCATGGTCTCTCACACCACTACCACCACCAACAACAATGACACATTGGTGATGCCACCATCATCATCTTCACAACTGTCCTCTGATAGGTATATGGATCTCCGTCAAGATCCACCAAAGGTCATTCCCAAATCCTCCACCAAAAAACGAATGGGTAGACCTTTGGGCTCTAAGAACAGGCCCAAAGCACGCGTCATTGTCGAGGAAGACAAGGAAACCTTCACAGAAGTAGTTACACTTCAAATCCCACTTGGAGAAGATATTGTGGAGCATATAATCAAGTATGCTCAACAACGTCAAGCTAACATAATAGTGTCGAGGGGTTTCGGTCTTATTTCTAACATTACCTTTCTTGATCCAGTATCACGTGTCCCATTATTACCCATCGAAGGACCCGTGCATATGACATCTCTATTTGGAACATATATAAATCCAAATTGTGAATGTCCTCCTCGAAAATTCATAACTGATCCACCATGTTCCTCTTTTACCGTATATTTCTCTAGTCCTAATGGATATGTATTTGGTGGAATTGTTGGTGGAAAGGTTAAGGCTGCTGGTGTTATTTTGATTAATGCCACTCTTGTTTGGACAACTTTGTTCCACAGGGCAATCTCCTCCAATAGAAATGTTCGAGAAAATGAAGAGGGTGGACCAATATATGTTGATGGTGGCATCACTAATGTTAATCATGTAGCATATGAATCTGACAACAACAGTAATAACAACAATGTTTTTCATATGCCTACTAGCTTTAATGGTGTGGATGCTAATTCAACTCAATTGAATTATCAACTTCCCTCTCAATATCTTCCTATTGATGAGAACGTCATTGATGAGAACTTCATGCAGTGGAACCACTCCAATCACCCTCATTATTAG 903 0.4042 MVEGNNEIMVSHTTTTTNNNDTLVMPPSSSSQLSSDRYMDLRQDPPKVIPKSSTKKRMGRPLGSKNRPKARVIVEEDKETFTEVVTLQIPLGEDIVEHIIKYAQQRQANIIVSRGFGLISNITFLDPVSRVPLLPIEGPVHMTSLFGTYINPNCECPPRKFITDPPCSSFTVYFSSPNGYVFGGIVGGKVKAAGVILINATLVWTTLFHRAISSNRNVRENEEGGPIYVDGGITNVNHVAYESDNNSNNNNVFHMPTSFNGVDANSTQLNYQLPSQYLPIDENVIDENFMQWNHSNHPHY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi648g00002 300 MobiDBLite consensus disorder prediction 13 38 - -
Vivi648g00002 300 Gene3D - 83 220 - -
Vivi648g00002 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 215 IPR014476 GO:0003680
Vivi648g00002 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 217 - -
Vivi648g00002 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 198 IPR005175 -
Vivi648g00002 300 MobiDBLite consensus disorder prediction 13 67 - -
Vivi648g00002 300 ProSiteProfiles PPC domain profile profile. 79 224 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi648g00002 55 210 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.747 2.12e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi648g00002 - - vvo:131613388 572.007