Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi648g00001 ATGGCACACAAAGAATTTGCATCTTCTTCTTTTCCCTCAAACTCCAACAATGATTCCTTAGAAAACAACCCTGATATGTTTTCTATACATCTAGATAACCCTCTTTCTAGGGTGGGATGCAACAACGAGTTCACGGTCTCTAACACCACCACCAACACCAACAACAATGACACATTGGTCATGCCACTTCCATCATCTACACAACCGTCATTTGGTAGGTATGTGGATCAACCATCATCTGGTAGGTATGTTGATCAGCCTCAAGATCCACCGGAGGACCCTACCAAATCCTCATCCAAAAAGAGAATGGGTAGACCATTGGACTCTAAGAACAAGCCCAAACCACACATCATTATTGAGGAAGACACTGAAAACTTCACTGAGCTGGTAGGACTTGAGATCCCAATAGGAGAAGATATTGTAGAGTATATAATCAAATATGCTCAACAACGTCAAGCTAACATAATAGTGTCGAGGGGTTTCAGACTTATCTCTAATGTTACCATTCTTGCTCCAGGATCTCGTGACCCATTATTACCCATCGAAGGACCCATACATATGACATCTTTATTTGGAACATATATAAATCCAAATTGTCAATGTTCTCCTCCACAGTTCATAGCTCATCCAACATGTTCCTCTTTTTCCATATACTTCTCTAGTCCTAATGGATATGCGTTTGGAGGAGTTGTTGGTGGAAAGATTACTGCTGCTAGTGTTATTTTTATTAATGCCACTATTTCTAGGAAAACAACGTTCCACAAGGCGAACTCCACCAATAGAATTGTTTGA 792 0.404 MAHKEFASSSFPSNSNNDSLENNPDMFSIHLDNPLSRVGCNNEFTVSNTTTNTNNNDTLVMPLPSSTQPSFGRYVDQPSSGRYVDQPQDPPEDPTKSSSKKRMGRPLDSKNKPKPHIIIEEDTENFTELVGLEIPIGEDIVEYIIKYAQQRQANIIVSRGFRLISNVTILAPGSRDPLLPIEGPIHMTSLFGTYINPNCQCSPPQFIAHPTCSSFSIYFSSPNGYAFGGVVGGKITAASVIFINATISRKTTFHKANSTNRIV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi648g00001 263 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 243 IPR005175 -
Vivi648g00001 263 Gene3D - 129 260 - -
Vivi648g00001 263 MobiDBLite consensus disorder prediction 46 75 - -
Vivi648g00001 263 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 79 255 IPR014476 GO:0003680
Vivi648g00001 263 MobiDBLite consensus disorder prediction 94 115 - -
Vivi648g00001 263 MobiDBLite consensus disorder prediction 46 115 - -
Vivi648g00001 263 ProSiteProfiles PPC domain profile profile. 124 263 IPR005175 -
Vivi648g00001 263 MobiDBLite consensus disorder prediction 1 25 - -
Vivi648g00001 263 MobiDBLite consensus disorder prediction 7 25 - -
Vivi648g00001 263 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 253 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi648g00001 100 255 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 26.582 1.18e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi648g00001 - - vvo:131613386 489.96