Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi646g00028 ATGGAGAAGAAAGAGATGGGTGTGATGAGTGTGAAGAGTGAAGAAGATGTTGTTGTTGGTGTTGGTGTTGGTTCTTCATCTTTGTTAAACGGTTTTCAGTTTTCAAGCGTGTTTGATTTCAGTGATGCAGAAAAAAGCTCTTCTTTAGGGTTTATGGAGTTACTGGGTGTGGAAAACTATAGTTCTTTGCTTGATGTACCTCAACTATCAACCATGAGTCATCATCAAACTACAGTTAAATCTTCATCTGATAATAATGGAAAAGAGTGTTCAGAGGTTTTGAATCAACTACCTCAAACTCCTAACTCTTGCTCGATTTCATCGGCTTCTAGTGAAGCAGTTAATGATGAACAACGCAATAAGACTCTTGTTGACCAAGTCCAAGAAGATGAAGATGATGAGGAAAAACAAAAAACCAGTAAACAGTTGAAGACTAAGAAGACAAATCAAAAGAGACAGAGGGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAGAACAGCCCCTTTCCAAGGAGCTATTATCGCTGCACCACTGTTTCATGTAATGTGAAGAAACGTGTGGAGCGTTCTTATACTGATCCAACCATTGTTGTCACAACTTATGAAGGCCAACACATTCATCCAAGTCCAGCTATGTCCCGTTCCGCCTTCGCCGGAGTTCAGATATCACCACCGACTGCTGTTTCCGGTGGGTTTCCTACTAACTTTGGTTCAGTTTTGCAAGGGAACTACTTATCATCACAGTATCAGCAGCAGCAACAGCACCATCAGCAACATCAACAGCTACTGGTTAATACATTGTCCTCTTTGAGTAACCCTTATAATTACAATTCTTCTGCTTTTACTCAAGAGAGGAAGCTTTGTAATCCAGGGACAACTACTTCCTTTCTTAGGGACCATGGTCTTCTTCAAGATGTTGTTCCTTCACATATGTTAAAGGAAGAGTAA 1005 0.409 MEKKEMGVMSVKSEEDVVVGVGVGSSSLLNGFQFSSVFDFSDAEKSSSLGFMELLGVENYSSLLDVPQLSTMSHHQTTVKSSSDNNGKECSEVLNQLPQTPNSCSISSASSEAVNDEQRNKTLVDQVQEDEDDEEKQKTSKQLKTKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKRVERSYTDPTIVVTTYEGQHIHPSPAMSRSAFAGVQISPPTAVSGGFPTNFGSVLQGNYLSSQYQQQQQHHQQHQQLLVNTLSSLSNPYNYNSSAFTQERKLCNPGTTTSFLRDHGLLQDVVPSHMLKEE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi646g00028 334 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi646g00028 334 PIRSF WRKY_txn_fact_IIc 1 334 IPR017396 GO:0003700
Vivi646g00028 334 MobiDBLite consensus disorder prediction 97 117 - -
Vivi646g00028 334 MobiDBLite consensus disorder prediction 97 154 - -
Vivi646g00028 334 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi646g00028 334 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 91 279 IPR044810 GO:0003700
Vivi646g00028 334 SUPERFAMILY WRKY DNA-binding domain 161 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi646g00028 334 FunFam WRKY transcription factor 57 155 229 - -
Vivi646g00028 334 SMART WRKY_cls 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi646g00028 334 Gene3D WRKY domain 153 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi646g00028 36 334 WRKY Transcription Factor Family AT2G47260 49.848 1.16e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi646g00028 WRKY 3.6e-25 CL0274