Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi645g00002 ATGGAGACTGTTCTTTCCAAACACTCCCCACCTTCTTCTGCCTTCAAGGGTGTGAGCAAAGAAGAGGAAGAATCTCTGCTTGGACAAATTGAAATATGGAAATACATGACACAGTTCACCGACTCATTTGCTCTAAAAGCTGTTGTTGAGCTACGCATAGCTGACATAATAGATAGATATGGCAAACCAATATCCTTGTCACAAATTGTGCAAGAACTCGAAAATGCACCCTCCCCTGATTCCTCTCTTCTCTTAAGAGTAATGAGAGTCATGGTTCGTAGAAAAATTTTCAGTGCAGAAAAATCCGAATCCGGAGAGATTCTCTACGGTATAACACGTGCCTCAAAATGGATCCTACAAGACACAAAAATGACACTGGCGCCTATGTTGTTGCTAGAGAATCACCCTTTTCATTTGAACCCTGCTAATTACATTAGTGAAATTGTTAGAGAAGGAACCAAAAATGGCACTGCTTTCTTTAGGTGTCATGGTCATGAACAATTCGAAATGACCGGTTTGGACTCGAAATACAATGACTTGTTTAACCAAGGTATGGTTTGCACTGCTAGGATCGTGTCCAGGGCTGTTATTGCAGGGTACAAAGACGGGTTTAACCAGATTAAGTCTTTGGTTGATGTTGGTGGTGGTATTGGTGGATCTCTGTCTGAGATTGTTAGAGCTTATCCTCATATTCAAGCTATTAACTTTGATTTGCCTCATGTTGTTTCAACTGCTCCTAAATTTGATGGTATCACACATGTCGGAGGAGACATGTTTGTTTCTGTTCCTAGTGCTGATGCTATTTACATGAAGTGGATTCTTCATGACTGGAGCGACGACCATTGCATAAAGATTTTGAAGAATTGTAGGAAGGCGATACCGGAGAAAACAGGAAAGGTGATCATTGTGGATCATGTTTTGGATCCAGAAGGTGCTGAACCGTTTACCGACACTGGCATAGCATTTGACATGATGCTTCTTGCACATAATGCTGGTGGTAAGGAAAGGACTGAAGAGAACTGGCAATACTTATTCAAAGAGACGGGATTCCCTCGTTACAACATCATCAAAATCAATGCTCTTCCATCCATCATTGAGGCATTTCCAATCTAA 1113 0.4124 METVLSKHSPPSSAFKGVSKEEEESLLGQIEIWKYMTQFTDSFALKAVVELRIADIIDRYGKPISLSQIVQELENAPSPDSSLLLRVMRVMVRRKIFSAEKSESGEILYGITRASKWILQDTKMTLAPMLLLENHPFHLNPANYISEIVREGTKNGTAFFRCHGHEQFEMTGLDSKYNDLFNQGMVCTARIVSRAVIAGYKDGFNQIKSLVDVGGGIGGSLSEIVRAYPHIQAINFDLPHVVSTAPKFDGITHVGGDMFVSVPSADAIYMKWILHDWSDDHCIKILKNCRKAIPEKTGKVIIVDHVLDPEGAEPFTDTGIAFDMMLLAHNAGGKERTEENWQYLFKETGFPRYNIIKINALPSIIEAFPI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi645g00002 370 PIRSF O-mtase 12 370 IPR016461 GO:0008168
Vivi645g00002 370 CDD AdoMet_MTases 210 307 - -
Vivi645g00002 370 MobiDBLite consensus disorder prediction 1 20 - -
Vivi645g00002 370 Gene3D Vaccinia Virus protein VP39 120 370 IPR029063 -
Vivi645g00002 370 SUPERFAMILY "Winged helix" DNA-binding domain 22 121 IPR036390 -
Vivi645g00002 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 367 IPR029063 -
Vivi645g00002 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 369 IPR016461 GO:0008168
Vivi645g00002 370 Gene3D - 15 118 IPR036388 -
Vivi645g00002 370 Pfam Dimerisation domain 44 92 IPR012967 GO:0046983
Vivi645g00002 370 FunFam O-methyltransferase family protein 120 368 - -
Vivi645g00002 370 PANTHER O-METHYLTRANSFERASE 32 352 IPR016461 GO:0008168
Vivi645g00002 370 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi645g00002 43 356 Monolignol Biosynthesis Gene Families AT5G54160 38.509 1.04e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi645g00002 K22588 - gmx:100812768 656.366