Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi644g00017 ATGTCTCCACCTGGTTCATCAAGATGGAGCCCTACTACTGAACAGCTTATGATCTTGGAAGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATTACTACTCACCTTTCTTTCTATGGTAGAATAGAGGGAAAAAATGTTTTCTATTGGTTTCAGAATCATAAGGCTAGGGATAGACAGAAACTTAGAAGGAAACTCAACAAACAACTGCAGCTACAGCAGCAACAGCAACAGCAGCAGCATCAACAACAATTACAAGTTCATCATTGTCAACTCAATCATGATAACATGATGATCAATAACCATTTTGTTGGTGGTACTTTTGGTTACCCTTTTGGATCTTCTACTCAAGACTTTTCCTTTTTTAACTCGCCTAGCTTGCTTTTTGAGGGATCATATGCTGCAAGCACATCAGAAGGACCAATCAATAGCAAATGGAATGGTTATAACAACCAACCAAGTTTGATGGAGAAGAAAGAGATTGCATTCAACAACTATGGTTGGAACCTTATGGATAATGTTAATCATGAATCACCTTCATGTTGCACCAAACCTCTCAAGACTCTTGATCTCTTTCCACTCACAACAAGAATCAAAGAAGATTAA 624 0.3782 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQQQQHQQQLQVHHCQLNHDNMMINNHFVGGTFGYPFGSSTQDFSFFNSPSLLFEGSYAASTSEGPINSKWNGYNNQPSLMEKKEIAFNNYGWNLMDNVNHESPSCCTKPLKTLDLFPLTTRIKED 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi644g00017 207 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Vivi644g00017 207 Coils Coil 65 89 - -
Vivi644g00017 207 CDD homeodomain 8 67 IPR001356 GO:0003677
Vivi644g00017 207 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Vivi644g00017 207 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 202 IPR044555 GO:0003700|GO:0099402
Vivi644g00017 207 SMART HOX_1 4 71 IPR001356 GO:0003677
Vivi644g00017 207 SUPERFAMILY Homeodomain-like 5 69 IPR009057 -
Vivi644g00017 207 FunFam WUSCHEL-related homeobox 4 6 73 - -
Vivi644g00017 207 Gene3D - 2 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi644g00017 1 74 Wox Gene Family AT2G28610 83.784 7.47e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi644g00017 Homeodomain 6.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi644g00017 - - gmx:102663963 241.891