Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi643g00002 ATGGGCAGTGATGCAATGAGAAGCCAAGGGTACTATACGCTCAAGGATTTGAGTTTCGATTTTAAGGAACATGAAGGAACTTTCTCTATTTGCTTTTGGGTTTATTTCATGAATTCTACTACATTCCCTTCTGTCATTCTTCACCAGGTTCACGATGACATTTCTGAAAGTGCTCCTTTTCTCGTTATTAGCGATAATAACAGAATCAACGTTTTCCCAGTTCTTTACTTACATGAAGAAGCTTCTGCTACTTGCATGGGTTCTTGGACAGAAGTTCCACATGCTACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATATTGGATGCGAGGTTTGTCCAAATTATATTCGGCTTCACATTAATGGGGAAGTTGTAGGAGAAAAATCAATGTCTTCCTCATTAAATAAGGAATCCAATTCAAATAATTTGAAGGGAATAACTTTGGCTAATGTATGTGGAGACAGAAATATTGTGCAGGGTTATGTGCACAGTTTTGAAGGATTCCATACTGTTTCTTCTATCAAAGATCATCATTTAAAGGACCCTCCTCTGAAGTTATCATTCGATGAATCATCTGTCTCTGAGGTTGAAGAAGAAAGTGATGGTGTTTGGGGCATTGTTGGTGGAAAAGCATCATGTCGCAGGAATTTTTCTTTAGACGTTGTTTTATCAGATGCATTTGGACAACCTGTACATATGGATAATGAGGTTTTTGCTTCACTTGTATATGCTGACACGGGGGCTCCAGTGGAGAATACAACTGACAATGAAGCTCCTCTTTTGTCTAGCTATGATGGAATTGAATTTTCTTCTTGTGAAAGACCTAGTAAGTTTTTGTTGGGTCGTGCATCGTTTAAGCTCAGGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTGCCAAAATTAGGAAATTATCCTTTCCTTCAGACACACACCCGTCCAATTCGATGCATCTCTAGGAGCCGTAACACTAAATTATCCACGTTGGTGTGGAAAAAGTCAACACATGCTCTCCAAAGACTCAATTTGTCACAATCTTCAGCAATTGGTGATGGGTTGTTGGAACGTATGAATTCTAGCCTTGAAGAAAAAACCAATCCACTGATGAAGCGGTTTAGAGTTGGACTTGACAAGATATCGATGTCAGTTATGGCCGAGCCCAACTTAAAGCGATCTGGTGTGGAATGTAATTCTCACGTATCGACTGCTAATCAGGTTGAGAATGGGTGTCCTGTAAGCTTAGATGACAGATCTCTTAACTTTGAAGAAGCAGATGACTCTCCTTCTGAATCATCAGAGAGTACAGAGGAGAGAAACTCACCTTCAAATAATATGGAAAGTAGAAGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTAGCAGGCTTGGCTGAAAGATCTCACATGCTTAAAGAAATTGCCATCTCTGCATCTGATGAAGACATTTCAGCGTTGGCTTATCATGTTTCACACTATTCAGGATGTTCCCACCATGGAAACCAGATATTAATTTCCAAGAGGTTGATAGAAGATGGAACTAATCTTTGGATGGCGATGTCTCCAAATAAAAACCACGTTCCTTGGGAAAGAGCAGTGTATGAAATCGAAGAGAAGTTCATGAAGATTGCTTCTTGTCTCACAAGATCTCTCTCCCATCAGGACTTCGAGATTCTGAGAAGGATTGCTGGATGTGAAGAGTATTTAACACAAGAGAACTTTGAAAAATTGTGGTGCTGGTTGTACCCTGTAGCGTGTGTATTATCGAGGGACTGGGTAAATCCTATATGGAATTCCATGTCACCTAAATGGATTGAAGGATTCATTACCAAGGAGGATGCAGAAGCTTCACTTCAAGGTCCAGGAGGATTTCAAGAACCCGGTACTTTTATACTACGGTTCCCAATCTCAAGAAGCTGGCCTCACCCAGATGCTGGTAGCCTGACTGTTACTTATGTTGGCAGTGACTACAAACTACGCCACAGGCTACTTTCAATGGATCATATATACGGCTCTGATAGAATAACTGACGTGAAACCATTGCAAGATATGTTACTTGAAGAACCTGAGCTGACTCGGTTGGGGAGGGTAATAAGAAGATATTAA 2139 0.4016 MGSDAMRSQGYYTLKDLSFDFKEHEGTFSICFWVYFMNSTTFPSVILHQVHDDISESAPFLVISDNNRINVFPVLYLHEEASATCMGSWTEVPHATVDFEFPLEKWVHIGCEVCPNYIRLHINGEVVGEKSMSSSLNKESNSNNLKGITLANVCGDRNIVQGYVHSFEGFHTVSSIKDHHLKDPPLKLSFDESSVSEVEEESDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVHMDNEVFASLVYADTGAPVENTTDNEAPLLSSYDGIEFSSCERPSKFLLGRASFKLRISQLSSKCDNRLFLIRFCVPKLGNYPFLQTHTRPIRCISRSRNTKLSTLVWKKSTHALQRLNLSQSSAIGDGLLERMNSSLEEKTNPLMKRFRVGLDKISMSVMAEPNLKRSGVECNSHVSTANQVENGCPVSLDDRSLNFEEADDSPSESSESTEERNSPSNNMESRRYPISDMTIFKYCLAGLAERSHMLKEIAISASDEDISALAYHVSHYSGCSHHGNQILISKRLIEDGTNLWMAMSPNKNHVPWERAVYEIEEKFMKIASCLTRSLSHQDFEILRRIAGCEEYLTQENFEKLWCWLYPVACVLSRDWVNPIWNSMSPKWIEGFITKEDAEASLQGPGGFQEPGTFILRFPISRSWPHPDAGSLTVTYVGSDYKLRHRLLSMDHIYGSDRITDVKPLQDMLLEEPELTRLGRVIRRY 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi643g00002 712 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 147 IPR013320 -
Vivi643g00002 712 Gene3D SH2 domain 602 710 IPR036860 -
Vivi643g00002 712 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 18 702 IPR001217 GO:0003700|GO:0006355|GO:0007165
Vivi643g00002 712 ProSiteProfiles Src homology 2 (SH2) domain profile. 615 712 IPR000980 -
Vivi643g00002 712 MobiDBLite consensus disorder prediction 432 458 - -
Vivi643g00002 712 SUPERFAMILY SH2 domain 608 705 IPR036860 -
Vivi643g00002 712 Gene3D - 4 176 - -
Vivi643g00002 712 MobiDBLite consensus disorder prediction 444 458 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Vivi643g00002 Laminin_G_3 1.9e-06 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi643g00002 - - cam:101502730 1130.93