Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi643g00001 ATGGGCAGTGATGCAATGAGAAGCCAAGGGTACTATACGCTCAAGGATTTGAGTTTCGATTTTAAGGAACATGAAGGAACTTTCTCTATTTGCTTTTGGGTTTATTTCATGAATTCTACTACATTCCCTTCTGTCATTCTTCACCAGGTTCACGATGACATTTCTGAAAGTGCTCCTTTTCTCGTTATTAGCGATAATAACAGAATCAACGTTTTCCCAGTTCTTTACTTACATGAAGAAGCTTCTGCTACTTGCATGGGTTCTTGGACAGAAGTTCCACATGCTACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATATTGGATGCGAGGTTTGTCCAAATTATATTCGGCTTCACATTAATGGGGAAGTTGTAGGAGAAAAATCAATGTCTTCCTCATTAAATAAGGAATCCAATTCAAATAATTTGAAGGGAATAACTTTGGCTAATGTATGTGGAGACAGAAATATTGTGCAGGGTTATGTGCACAGTTTTGAAGGATTCCATACTGTTTCTTCTATCAAAGATCATCATTTAAAGGACCCTCCTCTGAAGTTATCATTCGATGAATCATCTGTCTCTGAGGTTGAAGAAGAAAGTGATGGTGTTTGGGGCATTGTTGGTGGAAAAGCATCATGTCGCAGGAATTTTTCTTTAGACGTTGTTTTATCAGATGCATTTGGACAACCTGTACATATGGATAATGAGCAGGTTTTTGCTTCACTTGTATATGCTGACACGGGGGCTCCAGTGGAGAATACAACTGACAATGAAGCTCCTCTTTTGTCTAGCTATGATGGAATTGAATTTTCTTCTTGTGAAAGACCTAGTAAGTTTTTGTTGGGTCGTGCATCGTTTAAGCTCAGGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTGCCAAAATTAGGAAATTATCCTTTCCTTCAGACACACACCCGTCCAATTCGATGCATCTCTAGGAGCCGTAACACTAAATTATCCACGTTGGTGTGGAAAAAGTCAACACATGCTCTCCAAAGACTCAATTTGTCACAATCTTCAGCAATTGGTGATGGGTTGTTGGAACGTATGAATTCTAGCCTTGAAGAAAAAACCAATCCACTGATGAAGCGGTTTAGAGTTGGACTTGACAAGATATCGATGTCAGTTATGGCCGAGCCCAACTTAAAGCGATCTGGTGTGGAATGTAATTCTCACGTATCGACTGCTAATCAGGTTGAGAATGGGTGTCCTGTAAGCTTAGATGACAGATCTCTTAACTTTGAAGAAGCAGATGACTCTCCTTCTGAATCATCAGAGAGTACAGAGGAGAGAAACTCACCTTCAAATAATATGGAAAGTAGAAGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTAGCAGGCTTGGCTGAAAGATCTCACATGCTTAAAGAAATTGCCATCTCTGCATCTGATGAAGACATTTCAGCGTTGGCTTATCATGTTTCACACTATTCAGGATGTTCCCACCATGGAAACCAGATATTAATTTCCAAGAGGTTGATAGAAGATGGAACTAATCTTTGGATGGCGATGTCTCCAAATAAAAACCACGTTCCTTGGGAAAGAGCAGTGTATGAAATCGAAGAGAAGTTCATGAAGATTGCTTCTTGTCTCACAAGATCTCTCTCCCATCAGGACTTCGAGATTCTGAGAAGGATTGCTGGATGTGAAGAGTATTTAACACAAGAGAACTTTGAAAAATTGTGGTGCTGGTTGTACCCTGTAGCGTGTGTATTATCGAGGGACTGGGTAAATCCTATATGGAATTCCATGTCACCTAAATGGATTGAAGGATTCATTACCAAGGAGGATGCAGAAGCTTCACTTCAAGGTCCAGGAGGATTTCAAGAACCCGGTACTTTTATACTACGGTTCCCAATCTCAAGAAGCTGGCCTCACCCAGATGCTGGTAGCCTGACTGTTACTTATGTTGGCAGTGACTACAAACTACGCCACAGGCTACTTTCAATGGATCATATATACGGCTCTGATAGAATAACTGACGTGAAACCATTGCAAGATATGTTACTTGAAGAACCTGAGCTGACTCGGTTGGGGAGGGTAATAAGAAGATATTAA 2142 0.402 MGSDAMRSQGYYTLKDLSFDFKEHEGTFSICFWVYFMNSTTFPSVILHQVHDDISESAPFLVISDNNRINVFPVLYLHEEASATCMGSWTEVPHATVDFEFPLEKWVHIGCEVCPNYIRLHINGEVVGEKSMSSSLNKESNSNNLKGITLANVCGDRNIVQGYVHSFEGFHTVSSIKDHHLKDPPLKLSFDESSVSEVEEESDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVHMDNEQVFASLVYADTGAPVENTTDNEAPLLSSYDGIEFSSCERPSKFLLGRASFKLRISQLSSKCDNRLFLIRFCVPKLGNYPFLQTHTRPIRCISRSRNTKLSTLVWKKSTHALQRLNLSQSSAIGDGLLERMNSSLEEKTNPLMKRFRVGLDKISMSVMAEPNLKRSGVECNSHVSTANQVENGCPVSLDDRSLNFEEADDSPSESSESTEERNSPSNNMESRRYPISDMTIFKYCLAGLAERSHMLKEIAISASDEDISALAYHVSHYSGCSHHGNQILISKRLIEDGTNLWMAMSPNKNHVPWERAVYEIEEKFMKIASCLTRSLSHQDFEILRRIAGCEEYLTQENFEKLWCWLYPVACVLSRDWVNPIWNSMSPKWIEGFITKEDAEASLQGPGGFQEPGTFILRFPISRSWPHPDAGSLTVTYVGSDYKLRHRLLSMDHIYGSDRITDVKPLQDMLLEEPELTRLGRVIRRY 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi643g00001 713 ProSiteProfiles Src homology 2 (SH2) domain profile. 616 713 IPR000980 -
Vivi643g00001 713 MobiDBLite consensus disorder prediction 433 459 - -
Vivi643g00001 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 147 IPR013320 -
Vivi643g00001 713 MobiDBLite consensus disorder prediction 445 459 - -
Vivi643g00001 713 Gene3D SH2 domain 603 711 IPR036860 -
Vivi643g00001 713 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 18 703 IPR001217 GO:0003700|GO:0006355|GO:0007165
Vivi643g00001 713 SUPERFAMILY SH2 domain 609 706 IPR036860 -
Vivi643g00001 713 Gene3D - 4 176 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Vivi643g00001 Laminin_G_3 1.9e-06 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi643g00001 - - cam:101502730 1137.48