Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi641g00010 ATGGATCCCAAAAACTCAAAACACCAACACACAAACAACACCATGGGAGATGATAACAACAACAGCAGCAACAACAACAACAAACAACAAATTTCGGAATCAAAGAATCTGCAGATTGTGTCGTCTGAAATTGAAACCAAACAAGATGAAACAAAGAAACAGCTTGCACCAAAGAGAACATCAAACAAAGACAGACACACAAAAGTGGAAGGACGAGGAAGAAGAATAAGGATGCCGGCTTTATGTGCGGCGAGAATATTTCAGCTGACCAAAGAGTTGGGCCATAAATCAGATGGTGAAACGATTCAATGGCTTCTTCAACAATCTGAAGCGTCGATTATAGCTGCAACAGGAACAGGAACAATACCGGCTTCAGCTATGGCTTCATCGGGTAACAGTTTGACACCACAGGGTTCTTCTTTGTCTTCTGGTTTACAGTTGCAAACCAGCTGGCCTACCCATCAGGTTAGTTCATCAAGTTTATGGCCCCATGGATTTGGTTTTCATCAAACGTCTTCTGGTTTGACTACTGCAGCGGCTAGTGAGAATAGTTCGAGTTATTTTCAGAAAATTGGGTTTTCTGGATTTGATATGCCAGGGAGTAATTTGGGTGGGATGAGTTTTACATCAATTTTGGGTGGGAATCAGCAGATGCCACCTGGGTTGGAATTAGGTTTGTCGCAAGATGGACATATTGGGGTGTTGAATCAACAGGCTTTGAGTCAGATTTATCAGCAGTTTGGTCAAAATCATCAAACTAGGGTTCATCAGCAAAGTCAGAATCAGAATCCTAATAAGGATGATTCTCAAAGTTCTGAACAGTAG 825 0.417 MDPKNSKHQHTNNTMGDDNNNSSNNNNKQQISESKNLQIVSSEIETKQDETKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTKELGHKSDGETIQWLLQQSEASIIAATGTGTIPASAMASSGNSLTPQGSSLSSGLQLQTSWPTHQVSSSSLWPHGFGFHQTSSGLTTAAASENSSSYFQKIGFSGFDMPGSNLGGMSFTSILGGNQQMPPGLELGLSQDGHIGVLNQQALSQIYQQFGQNHQTRVHQQSQNQNPNKDDSQSSEQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi641g00010 274 ProSiteProfiles TCP domain profile. 62 116 IPR017887 -
Vivi641g00010 274 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 262 IPR005333 GO:0003700
Vivi641g00010 274 MobiDBLite consensus disorder prediction 127 146 - -
Vivi641g00010 274 MobiDBLite consensus disorder prediction 8 44 - -
Vivi641g00010 274 MobiDBLite consensus disorder prediction 45 72 - -
Vivi641g00010 274 Pfam TCP family transcription factor 60 215 IPR017887 -
Vivi641g00010 274 MobiDBLite consensus disorder prediction 249 274 - -
Vivi641g00010 274 MobiDBLite consensus disorder prediction 1 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi641g00010 1 244 TCP Transcription Factor Family AT3G27010 51.601 3.41e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi641g00010 TCP 8.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi641g00010 - - psat:127128219 446.817