Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi638g00013 ATGTTCACTATTCATCGCCACAAAACTCTTCTCTATCTCAAAGCGTTAACTTCTCAACCAAACCCTAACCCTATTTTTCACCATTTCTGCACTGCCACTTCCAAATCAACCCCATTTGCAGTCTCCTACCTCATCCACAATCTCGGCTTCTCCCCACAATCTGCTTCCAAACTTTCCTCCACTTACGAACTACGTTTCAAGACAACCCAGAAACCTGATTTAGTTCTCAACTTCTTCAGAAACCATGGTGTATCTGATTCCCAACTACGTCACATGGTTGCCAAGGCACCATGGCTACTTTCTTGTGACCCCTCCAAAAGGGTGTTTCCAAAGTTTCAATTTTTTCTCTCTAAAGGCGCTTCTACCTCTGACGTTGTTAACCTTGTCAGTAGGTGCCCCGTGCTCCTCTCTCCAAGCCTGGAAAATCATATAATCCCAACCTATGAATTTCTAAGTAGATTCTTGCAATCTCACAAGGGCATTGTTACTCATGCAATTCGAAATCCATTTTTATTTACTCACCATGTTGTGTCGCATAACATTAGAATGTTGATTGAGAATGGAGTTCCAGACTCTAGCATTTCAAGATTGCTTCGGGTGGATAGCAAGGTACTCAACACAAATGGCCTTCTAAAGCTGGTCCAGGAATTAAAGGATTTGGGGTTCAATCCTTCTCAAACCATTTTCTCAGTAGCATTGCATGCCAAAAGAACGGTAATGAAAGCCCGGTGGAAAGAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCGGATGAAGATGTTCTAGAAGCATTTCGAAAGCAGCCTCATTGTATGTTGACATCTGTTGATAAAATAAATTTAGTGATGAACTTTTGGGTCAATCGGTTGGGTTGGGATGCTATAGCCATTGCCAAAGTACCAAGGATTTTGGGGGCCAGTATGGAGAGAAAGATCATACCAAGGGCCTTAGTTGTGGAATTTCTTCTAAAGAAAGGTTTGCGAAAAAAGAAAGCAAGTTTAACTTCTCCATTTCTAATCACCGATGAAACGTTCATTGACAAATATATAAAACCTTTTAAGGAGGAGTCTTCTTATCTCTTAAAGCTTTATGAAGAAAAACTGAATCTTGCTCACGACAAGGACAACGAAGCTAGCATGATATGA 1146 0.4084 MFTIHRHKTLLYLKALTSQPNPNPIFHHFCTATSKSTPFAVSYLIHNLGFSPQSASKLSSTYELRFKTTQKPDLVLNFFRNHGVSDSQLRHMVAKAPWLLSCDPSKRVFPKFQFFLSKGASTSDVVNLVSRCPVLLSPSLENHIIPTYEFLSRFLQSHKGIVTHAIRNPFLFTHHVVSHNIRMLIENGVPDSSISRLLRVDSKVLNTNGLLKLVQELKDLGFNPSQTIFSVALHAKRTVMKARWKEKVDVFKKWGWSDEDVLEAFRKQPHCMLTSVDKINLVMNFWVNRLGWDAIAIAKVPRILGASMERKIIPRALVVEFLLKKGLRKKKASLTSPFLITDETFIDKYIKPFKEESSYLLKLYEEKLNLAHDKDNEASMI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi638g00013 381 PANTHER CGI-12 PROTEIN-RELATED 37 356 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 SMART mt_12 195 223 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 FunFam Mitochondrial transcription termination factor-like 140 357 - -
Vivi638g00013 381 Gene3D Transcription termination factor 3, mitochondrial 140 362 IPR038538 -
Vivi638g00013 381 Pfam mTERF 244 345 IPR003690 GO:0003690|GO:0006355
Vivi638g00013 381 Pfam mTERF 76 269 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi638g00013 mTERF 4.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi638g00013 K15031 - gmx:102663414 379.022