Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi636g00021 ATGAATTGGGTTCGTGGAGACTTCTTAGGCAGTGGAAGTTTTGCCACGGTCAATTTAGCCAAACACATTAAACCCTCCGTTAACATTCCGTCTCTCACTGCCGTCAAATCATGTGAATTCTCCCATTCTCTTTCACTCCAAAAGGAGAAAAATATATTGGAACGTTTAAGATCATGCCCACACATTATTCACTGTTTTGGTCACGATTTAACTATTGAAAACGGAGAAGAGTATTACAATATTTTTCTAGAATATGCAAATTGCGGAACTCTCAATGATCAACTCAAGAATTACGACGGTAAGCTCCCCGAAAAACTCGTTCGTCGCTACACAAGATCCGTGGTTAAAGGCCTCAAGTATATTCACGAAAACGGTTTTGTTCATTGTGATTTGAAACCACCAAACATTCTCGTATTCGACAACGACAACGTTAAGATATCAGATTTCGGTCTTGCAAAAGAGATGGGAGTGGAAGAAGATAAAAAGATGAAATGCAAAGGAACTCCAATGTTTATGTCACCGGAAGCCGTGATGGACAATGTGTATGAATCTCCCGTAGATATCTGGGCTCTCGGTTGCACTGTTTTGGAGATTCTTACCGGAGAACCCGCATGGGATATAAGTTACAACACAGACCCGTTGAAGTTGTTGGTTCATATTGGGGTTAGCAAAGAAGTACCATTGATTCCAGAAAAAATATCAGAAGAAGCAAAAGATTTTCTTGAAAAATGTCTTGTTAGGGATCCACTGAAAAGATGGAGTGCTGAGATGCTTTTGAAACACCCTTTTATATCGGATGATGAAACTGTTTCTTCGGTTAAGGAGTCAACGTTTTCATCAACTTCTCCAGTTACTCACTTTGGGTTTTCAAATTGGAGTTCTTCAACTGTTACAACATTGCCTTACAGTTCAATAGAAGCTGACTATTGTTTTTTATCACAAGAAAAAAACCTACTAGATTGTTGGCCGGAAGAGATGCTTACCACCTCTGAGAAATCGTTAGATTTGTTAGAATATGACGAATGGTGTTTTGTTATATCCAATTAG 1047 0.3887 MNWVRGDFLGSGSFATVNLAKHIKPSVNIPSLTAVKSCEFSHSLSLQKEKNILERLRSCPHIIHCFGHDLTIENGEEYYNIFLEYANCGTLNDQLKNYDGKLPEKLVRRYTRSVVKGLKYIHENGFVHCDLKPPNILVFDNDNVKISDFGLAKEMGVEEDKKMKCKGTPMFMSPEAVMDNVYESPVDIWALGCTVLEILTGEPAWDISYNTDPLKLLVHIGVSKEVPLIPEKISEEAKDFLEKCLVRDPLKRWSAEMLLKHPFISDDETVSSVKESTFSSTSPVTHFGFSNWSSSTVTTLPYSSIEADYCFLSQEKNLLDCWPEEMLTTSEKSLDLLEYDEWCFVISN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi636g00021 348 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Vivi636g00021 348 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00021 348 CDD STKc_MAPKKK 2 264 - -
Vivi636g00021 348 Pfam Protein kinase domain 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00021 348 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00021 348 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Vivi636g00021 348 SUPERFAMILY Protein kinase-like (PK-like) 3 302 IPR011009 -
Vivi636g00021 348 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 281 - -
Vivi636g00021 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi636g00021 1 301 MAP Kinase Kinase Kinase AT3G50310 46.815 2.14e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi636g00021 Pkinase 1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi636g00021 - - psat:127123738 554.673