Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi636g00019 ATGGATTGGGTTCGCGGTGGTATGCTAGGTAGTGGAAGCTTCGCCACTGTCTATTTAGCCACACACACAAAACAATCTCTTAACTTTCCGTCTATCACCGCCGTCAAATCCTCCGAAAACTACACCTCACATTTTCTTCAAAAGGAGAAACACATACTAGATTGTTTAGGTTCATCTCCACATATTATCAAGTGTTTTGGTCACGATTTTACTTTTGAAAATGGCGAAGACTGTTATAATATATTTCTTGAATATGCTGCCGGTGGAACACTTTCCGATCAACTCAAGAATCACGGAGGAAAGTTTTCGGAAACTCTCATTCGCCGTTACACAAGGTCTGTTTTTGAAGGACTTAAACACATTCATGAAAACGGTTTTGTTCATTGTGACATAAAGCTAGAAAACATTCTTGTATTCGACAACGGAAATGTTAAGATTTCAGATTTCGGTCTAGCAAAGGAGAAAGGTTTAGAACATGGTGAGAAGAAGTTGGAATTCAGAGGAACTCCTATATTTATGGCGCCGGAGTCGGTTAACGATAGCGTTTATGAATCTCCGGTGGATATTTGGGCTCTTGGTTGCGCCGTCGTGGAAATGATTACCGGTAAACCAGCATGGATTATGAGTAGCAAGGAAAATATGCGGTCGTTGATGATTCGTATTGGGATTGGAAAAGAATTACCGTTGATTCCAGATGAATTATCAGAAGAAGGCAAAGATTTTCTTAAAAAGTGTTTTGTTAAAGATCCTATGAAAAGATGGAGTGCTGAGATGCTATTGAAACACCCTTTTATTTCTGATGATGATGAAACTGTTTTATCTATGAAAGAGTTGTCATTGCCATTAATGTCTCCAAGAACTCACTTTGATTTTATAATATAA 882 0.3832 MDWVRGGMLGSGSFATVYLATHTKQSLNFPSITAVKSSENYTSHFLQKEKHILDCLGSSPHIIKCFGHDFTFENGEDCYNIFLEYAAGGTLSDQLKNHGGKFSETLIRRYTRSVFEGLKHIHENGFVHCDIKLENILVFDNGNVKISDFGLAKEKGLEHGEKKLEFRGTPIFMAPESVNDSVYESPVDIWALGCAVVEMITGKPAWIMSSKENMRSLMIRIGIGKELPLIPDELSEEGKDFLKKCFVKDPMKRWSAEMLLKHPFISDDDETVLSMKELSLPLMSPRTHFDFII 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi636g00019 293 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Vivi636g00019 293 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Vivi636g00019 293 Pfam Protein kinase domain 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00019 293 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00019 293 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00019 293 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 267 - -
Vivi636g00019 293 CDD STKc_MAPKKK 2 265 - -
Vivi636g00019 293 Gene3D Transferase(Phosphotransferase) domain 1 2 287 - -
Vivi636g00019 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi636g00019 1 291 MAP Kinase Kinase Kinase AT4G36950 55.782 1.30e-111 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi636g00019 Pkinase 1.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi636g00019 - - cam:101502416 413.69