Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi636g00009 ATGGATTGGGTTCGCGGTCGTATGCTAGGTAGTGGAAGCTTCGCCACTGTCTACTTAGCCACACACACAAAACATTCGGTTAACTTTCCGTCTATCACCGCTGTTAAATCCTCTGAAAACTACACCTCACATTTTCTTCAAAAGGAGAAACATATACTGGATCGTTTAGGTTCATCCCCACATATTATCAAGTGTTTTGGGCACGATAATACTTTTGAAAATGGCGAAGACTGTTATAATATATTTCTTGAATATGCCGCCGGTGGAACACTTTCCGACCGGCTCAAGAATCATGGAGGCAAGTTCTCGGAATCTCTCGTTCGCAGTTACACGAGATCTGTTTTAGAAGGACTTAAACACATTCACGAGAACGGTTTCGTTCATTGCGACTTGAAGCTAGAAAACATTCTCGTATTCGACAATGGAAATGTTAAGATTTCAGATTTTGGTCTTGCAAAGGAGAAAGGTTTAGAACATGGTGAGAAGAAGTTGGAATTCAGAGGAACTCCTATATTTATGGCACCGGAGTCGGTTAACGATAGTGTTTATGAATCTCCGGTGGATATTTGGGCTCTTGGTTGCGCCGTCGTGGAAATGATTACCGGTAAACCAGCATGGATTATGAGTAGCAAGGAAAATATGTGGTCGTTGATGATTCGTATTGGGATTGGAGAAGAATTACCATTGATTCCACATGAATTATCAGAAGAAGGCAAAGATTTTCTTAAAAAGTGTTTTGTTAAAGATCCTATGAAAAGATGGAGTGCTGAGATGCTTTTGAAACATCCTTTTATTTCTTATGATGAAACTGTTTTATCTTTGAAAGAGTTTTCATTGCCATTAATGTCTCCCAGAACTCACTTTGATTTTATTCAATGGGCTTTTTCTACTGTGAAGACTTTACCGACGGAGAGACTCCAACAATTAGTTACATAG 936 0.3942 MDWVRGRMLGSGSFATVYLATHTKHSVNFPSITAVKSSENYTSHFLQKEKHILDRLGSSPHIIKCFGHDNTFENGEDCYNIFLEYAAGGTLSDRLKNHGGKFSESLVRSYTRSVLEGLKHIHENGFVHCDLKLENILVFDNGNVKISDFGLAKEKGLEHGEKKLEFRGTPIFMAPESVNDSVYESPVDIWALGCAVVEMITGKPAWIMSSKENMWSLMIRIGIGEELPLIPHELSEEGKDFLKKCFVKDPMKRWSAEMLLKHPFISYDETVLSLKEFSLPLMSPRTHFDFIQWAFSTVKTLPTERLQQLVT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi636g00009 311 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Vivi636g00009 311 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 267 - -
Vivi636g00009 311 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00009 311 Gene3D Transferase(Phosphotransferase) domain 1 2 291 - -
Vivi636g00009 311 SUPERFAMILY Protein kinase-like (PK-like) 2 299 IPR011009 -
Vivi636g00009 311 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00009 311 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00009 311 CDD STKc_MAPKKK 2 265 - -
Vivi636g00009 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi636g00009 1 311 MAP Kinase Kinase Kinase AT3G50310 51.227 2.90e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi636g00009 Pkinase 1.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi636g00009 - - cam:101502416 418.698