Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi636g00005 ATGCACAACCCTCCCACCGACACCACCATGTCCGACCAACTCTCCAACCAAACCTCCATCTTCGGCCTCCGTCTCTGGGTCGTCCTCGGTGTCTCTGTCGGTGTCGCCATCGTCCTCCTCCTCTTCCTCATCTCCATCTACCTCGCTTACAAACGCAACAACAACAATTCAAACTCCAAAACCTCCAAAACCTCAAAAACCTCAAAAACTTCCATTCCAAATATCTCCAAAGAGATCAAAGAAATCAAACTCGACATCCTTCCCTCAAATAATCCTCAACCCGACCCGTTTCCTGAACCCGACTCACTTTCCTCCACCGAACATGCTCAACACCAACAACAGCAACAACATCACATAGAAGAAGAAACTCCGTTGAGTTACAAGAGAATTCAGCTGGAGATAGGAAAAAACCATAGAATCTCTTACCCGGAACAACGTGCTACTTCTCGAGCTAGTAATAATAATAATAGTAATAATAATAATTCTCATGAAAATAGCGGAGAATCTAGACCGTTGGATCAAGTTCCTACTGTGATTCCGCAAGTTTCTCATCTCGGTTGGGGTCATTGGTATACTCTAAGAGAGTTGGAAGATGCTACCAATGCTTTTGCTCCTGATAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTATTTTGAAGGATAATACTAATATTGCGGTTAAAAATTTGCTTAATAACAGGGGACAAGCTGAGAGAGAGTTTAAGGTTGAAGTCGAAGCGATAGGACGAGTTCGGCATAAGAATTTGGTGAGGTTGCTTGGTTATTGTGCTGAAGGTGCTCATAGAATGCTAGTGTATGAGTTTGTTGATAATGGTAACTTGGAGCAATGGTTACATGGTGATGTTGGGCCGTGTAGTCCTCTAACATGGGAAATTCGAATGAACATTATTCTTGGAACAGCGAAAGGGTTGACTTATCTTCATGAGGGGCTAGAACCGAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGCTTAGTAAGCAGTGGAATTCAAAGGTTTCTGACTTTGGTCTTGCTAAACTCCTTAGCCCTGATAGCAGCTATATTACGACCCGTGTCATGGGAACATTCGGATATGTAGCTCCTGAGTATGCAAGTACTGGAATGTTGAATGAACGAAGTGATGTATATAGTTTTGGAATTCTTATTATGGAAGTGATTACAGGCAGGAATCCAGTTGAATATAGTCGTCCTGCTGAAGAGGTGAATTTAGTTGAGTGGCTCAAGAAGATGGTTGGTAACAGAAATCCAGAGGGAGTGTTGGATCCAAAGCTTCCAGAGAAACCAAGTTCGAGAGCACTTAAGCGAGCTCTTCTTGTAGCCTTACGATGCACCGACCCTAATGCACAAAAGCGACCCAAAATGGGACATGTAATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGTCGGGCCAGAAGGGAGGCAGCAGGACAGTCACCTATTACCAGAATAGAGGATAGATCGAAAGAGGAGGCCACTGTATCCGTTGATGATAGTATACTTGCAAACGAGAATTCAATAAGTGAGACAAGTTCAAATCATGAAATACAGAAGCAATAA 1608 0.426 MHNPPTDTTMSDQLSNQTSIFGLRLWVVLGVSVGVAIVLLLFLISIYLAYKRNNNNSNSKTSKTSKTSKTSIPNISKEIKEIKLDILPSNNPQPDPFPEPDSLSSTEHAQHQQQQQHHIEEETPLSYKRIQLEIGKNHRISYPEQRATSRASNNNNSNNNNSHENSGESRPLDQVPTVIPQVSHLGWGHWYTLRELEDATNAFAPDNVIGEGGYGIVYHGILKDNTNIAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWNSKVSDFGLAKLLSPDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVEYSRPAEEVNLVEWLKKMVGNRNPEGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARREAAGQSPITRIEDRSKEEATVSVDDSILANENSISETSSNHEIQKQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi636g00005 535 SUPERFAMILY Protein kinase-like (PK-like) 178 475 IPR011009 -
Vivi636g00005 535 SMART serkin_6 203 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00005 535 MobiDBLite consensus disorder prediction 145 172 - -
Vivi636g00005 535 MobiDBLite consensus disorder prediction 514 535 - -
Vivi636g00005 535 CDD STKc_IRAK 209 475 - -
Vivi636g00005 535 ProSiteProfiles Protein kinase domain profile. 203 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00005 535 Pfam Protein kinase domain 206 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi636g00005 535 MobiDBLite consensus disorder prediction 475 535 - -
Vivi636g00005 535 Gene3D Phosphorylase Kinase; domain 1 180 278 - -
Vivi636g00005 535 MobiDBLite consensus disorder prediction 145 173 - -
Vivi636g00005 535 MobiDBLite consensus disorder prediction 86 125 - -
Vivi636g00005 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Vivi636g00005 535 FunFam Putative receptor-like serine/threonine-protein kinase 279 489 - -
Vivi636g00005 535 Coils Coil 223 243 - -
Vivi636g00005 535 FunFam Probable serine/threonine-protein kinase At1g01540 183 278 - -
Vivi636g00005 535 MobiDBLite consensus disorder prediction 475 510 - -
Vivi636g00005 535 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Vivi636g00005 535 Gene3D Transferase(Phosphotransferase) domain 1 279 492 - -
Vivi636g00005 535 PANTHER OS01G0323000 PROTEIN 8 494 - -
Vivi636g00005 535 MobiDBLite consensus disorder prediction 54 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi636g00005 184 475 Receptor kinase-like Gene Family AT4G02010 44.781 1.18e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Vivi636g00005 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi636g00005 - - vvo:131634354 983.015