LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi633g00011	ATGGATAAAATAGGTATTGCTAGTTTTGGCAGTAAGGCAAGGCCTTATGTGTTAACAGTTGCGATTCAATTTGGGTTTGCAGGAGCATTCATATTCTCCATGGCCAGTTTCAATACTGGAATGAGTCGTTTTGTGTTCATTGTTTATCGTAATATCATTGCTGCAGTTTCCCTTGCTCCTTTTGCATGGTTTTTTGAAAGGAAAGTTAGGCCAAAGATGACTCTCTCTGTCTTTTTGCATATAATGGCGCTCGCACTATTAGAGCCAGTGATCGATCAAGGGTTCACTTTCTTGGGAATGCAATATACATCAGCTTCATTTACATCTGTTTTGACGAATACTGTGCCTTCTATAACCTTTTTCTTAGCCGTAATTTTCAGGATTGAACAAGTAAATATTAAGCAGATACGAAGCATAGCAAAGGTGGTTGGAACATTAGTAACATTTGGAGGTGCATTTCTGATGACAGTTTATAAAGGACCACAAATCCACCTTTTTTATTCTCCAAACAATGCTCATCATCATGCTGGAAGTCACGACACTCAAAGTCACAAACATTGGGTCTCAGGAACACTCTTTATATTATGTGGTTGTTTCGCTTGGTCATCTTTCTTCATATTACAGTCGATAACGTTGAAAAAGTATCCGGCTGAAATGTCATTGTCTACGTTAATTTGCTTATTTGGTTCTCTGATGAGTACCGCGGTGGCGTTGGTGGCTGAGCATAACTCTGGTGCGGGGACTTGGGCTCTTGGTTGGAACTTTAGACTCTATGGCCCTCTCTTCACGGGAATAGTAAACTCAGGAATAACATATTATGTGCAAGGGTTGGTAATGCAAAGCAGAGGCCCAGTATTTTTTGCAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTGGGCTCATTTCTATTCGGAGAACAGCTCCACTTGGGCAGTATCATTGGAGCTGTGATTATTGCAATGGGTCTTTATTTTGTGGTGTGGGGTAAAGCCAAAGACTATTCATCAGCCACAACTACTATGCCACCACCATCAGTTACAATGAAGCAAATCGAGACACAACAACTTCCAATTACTTCATCTGATCATGTCTAA	1101	0.4033	MDKIGIASFGSKARPYVLTVAIQFGFAGAFIFSMASFNTGMSRFVFIVYRNIIAAVSLAPFAWFFERKVRPKMTLSVFLHIMALALLEPVIDQGFTFLGMQYTSASFTSVLTNTVPSITFFLAVIFRIEQVNIKQIRSIAKVVGTLVTFGGAFLMTVYKGPQIHLFYSPNNAHHHAGSHDTQSHKHWVSGTLFILCGCFAWSSFFILQSITLKKYPAEMSLSTLICLFGSLMSTAVALVAEHNSGAGTWALGWNFRLYGPLFTGIVNSGITYYVQGLVMQSRGPVFFAAFNPLCMIITCALGSFLFGEQLHLGSIIGAVIIAMGLYFVVWGKAKDYSSATTTMPPPSVTMKQIETQQLPITSSDHV	366

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi633g00011	366	PANTHER	WAT1-RELATED PROTEIN	15	336	IPR030184	GO:0016020\|GO:0022857
	Vivi633g00011	366	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	49	158	-	-
	Vivi633g00011	366	Pfam	EamA-like transporter family	189	329	IPR000620	GO:0016020
	Vivi633g00011	366	Pfam	EamA-like transporter family	16	155	IPR000620	GO:0016020
	Vivi633g00011	366	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	251	333	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi633g00011	1	365	Nodulin-like Gene Family	AT2G37460	45.479	3.92e-119	348

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi633g00011	-		-	gmx:100775669	526.168