Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi633g00002 ATGGGTGCATGGTTAAGAACTGCAAAGCCATATTTACTACTCTTGGCAGTTCAATTTGGTTCTGCAGGAATGTTTATTTTTGCCATGGATGCTATCAAGAAAGGAATGAGCCATTACGTTTTCATCGTCTACCGTAATGCTCTCGCCACTGTAACATTAGCTCCATTCGCATTTTACCTAGAAAGGAAAATTAGGCCGAAGATGAATTTTCGTGTATTTTCAGAGATTATGTTACTGGCTTTCTTCGAAATAATACTGGATCAATGTTTTGCCTTGTTGGGAATGAAATTAACGTCCGCTTCGTTCCTTTCCGCTGTGATGAACTCTGCGCCCTCCATTACTTTTCTGTTTGCAGTCATTTTAAAATTGGAGCACATGAAGATAAAGGAAATAGCATGTCAAGCAAAAATGATTGGTACTGCAATTACATTTGCAGGAACATTGTTAATGGCTCTATACAAAGGCCCTGTAGTTAGTGTTGTGAACTCATCTATTAGTCATGCTACCAACCAGTCTGAGATTGTGAACGATTCCAGTAATAACCGGTGGATCGTAGGAACATGTTTCCTCCTCATTGGCTGCGCTGGTTTTTCCGCCTTTTACATATTGCAGGCCATAACATTGAGAAAGTACCCTGCACCGATGTCTCTGGCAACATGGGTTTGTTTCGTTGGCGCGCTTCAAAGCTTTGTGGTGACAATTATCGCCGAGCGTCATAATTCTCATGCCTGGGCTCTTGGTTGGGATTCACGGCTCTTCGCCCCAGCATATGCGGGGATAGTTACATCTGGAGTACAGTATTACATACAAGGGGTGGTTATGAAAGCTATGGGTCCAGTTATTGTAACTGCATTCAATCCGTTGCGAATGATCATCGTAACGGCCTTGGCCTGCATCATTCTTTCTGAGCAGCTCTTTCTTGGAAGTATTATTGGAGCAATAGTGGTGGTTCTTGGGCTTTATCTAGTTGTCTGGGGAAAATCGAAAGAACAGAAAGCCCGGAATAATGATATTCATATGGCAGAGTCACCTACCAAGGAGAACCCATTACAAGACCAACATCAGTTACAGTTACCTGTCACAGCTCCTAAAAATGAAAGTAGAAATGATAATAAAGCTCAATTGGTCATGCATGGAGAAGAAATATGTTACAATTGTGGAAGAAATTGA 1170 0.4171 MGAWLRTAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNALATVTLAPFAFYLERKIRPKMNFRVFSEIMLLAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFLFAVILKLEHMKIKEIACQAKMIGTAITFAGTLLMALYKGPVVSVVNSSISHATNQSEIVNDSSNNRWIVGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFVGALQSFVVTIIAERHNSHAWALGWDSRLFAPAYAGIVTSGVQYYIQGVVMKAMGPVIVTAFNPLRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKSKEQKARNNDIHMAESPTKENPLQDQHQLQLPVTAPKNESRNDNKAQLVMHGEEICYNCGRN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi633g00002 389 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020
Vivi633g00002 389 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Vivi633g00002 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 329 - -
Vivi633g00002 389 PANTHER WAT1-RELATED PROTEIN 10 340 IPR030184 GO:0016020|GO:0022857
Vivi633g00002 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi633g00002 5 377 Nodulin-like Gene Family AT2G39510 43.651 5.00e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi633g00002 - - psat:127084085 690.263