Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi630g00011 ATGAATTTATTTCCTGCAATTACTCTTGTGTTTGTGTTGCTTATTCCATCTTCACTTGCACAATTATCACAAACTGAAACAAGAATTCTCTTCCAAGTCCAGAAGCTTCTAGAATATCCTCAAGTTCTTCAAGGATGGAACAACTGGACAAACTTCTGCTTCCTCCCTCCTTCACCATCACTCATAATAGTCTGTTCCAACGGCCGCGTAACCGAATTAACCATCATCGGAAACCGAACTTCTCCATCTTCACACAGTTCAGAACCTTTTCAAGCACTTTCCGGAACTTTCTCAACTGATTCATTTTTCACTGTTTTAACAAAACTTTCAAATTTGAAGATTCTGTCATTAGTTTCATTAGGTCTATGGGGTCCATTACCAGAAAAAATCAACAGGTTTTCATCTCTTGAAATTCTCAACATTAGTTCGAATTTCATTTCCGATGAAATTCCGCGTTCAATATCTTCGATGAAGAACTTGAAGAGTGTTGTTTTGGCTGATAACCTTTTAAATGGAAGTGTTCCGGATCTTAAAAGTTTAGCTTCTCTTGAAGAGGTTAATCTTGATGGAAATAAACTCGGTCCGGAATTTCCTTCTATTGGGAACAATATTGTGAAAATCATCTTGAGAAAAAACTCCATAACATCTCAGATTCCTCTTGATCTTTCGAATTTCGAGAAACTTCAAATTTTCGATGTTTCTTCGAATAATTTGATCGGGAGAATTCCGATTTCTATATTCTCTTTACCTTCACTTCATTACCTAAATTTGTCTTCAAACAAATTAAGTGGGAACCTCACGACGAATTCGCGATGTAGTTCATCTTCATCGTTGAATTATGTTGATATTTCGCGTAATTTTCTAGTGGGAAAGTTACCGTCATGCATGGTGAAATCTAAGGCGAAAGTGTTGTATTCGTGGAATTGTTTGTCGACGAAAAGTTCGAACGCTGAACAGCATTCTTTATCATATTGCAAAAAAGATGCGGCTTTGGCTGTTAGGCCTCCTAAGAGAAAGGTGGAGAAGGGATCAAGTATGAAATTAGGACTTGTGCTTGTTATTGTTGGAGGTGTTGTGGGAATTGCTTGTGTTTTGGCTTTGATCATTGTGTTTGTCTTGTGGAGGGCCAAGCCAGAAAGATTGAATCATAGTATGGATCGATCTGTGGCTCATAAGGTTTCAGAAAAATCAAACATGAATGCAAGACATGTTCCTCAAACAATGAGGCTAGGTACACATGGACAACCACCATACAATATTTTCACAGAAGAAGAAATTGAAGATGCAACAAACAACTTTGACCAGTCAAATCTAATAGGAGAAGGATCACAAGGACAGATATATAAAGGTTGGTTGAGAAATGGTTCAGTGGTCCTAATTAATTGTATAAAGATAAAGCAGAAGGGTTTACCACATAGCATTATGCAGCAGTTAGATGTATTACAAAATTTAAGGCATAGACATATGGTGAGTGTTCTAGGACATTGTCTCATTACTCATCAGGATCCTCCTCAAGTAACAAGCACAGTCTTCATTGTACATGAATACATCTCCAATGTGTCTTTGAGAGATCAACTTACAGATGGGAAAAAGAAGGATATGCTGAAATGGCCACAAAGAATGGCAATAAGCATAGGAATTGCAAGAGGAGTTCAGTTCTTGCATACAGGTGTTGCTCCTGGAGTATTTGGCAACAATTTAAAGATTGAGAATATTTTGTTGGATGATAGTCTCAATGCAAAAGTCAGTGGATACAGAATTCCATTACCATCCAAGAGCACAGTTAATGAACAAAGTGATGCAGAAAAAGAAAAAGAAGATATTTATCAGCTAGGTGTTATTCTACTTGAAGTCATTACTGGTAGACAAATTGCGTCCTCCAGTGAAGTAGAGCAGCTCAAGGATGAGCTTGAAAGAAGTTCATCAGAACCACCATCATCTATACTAAGAAGTACAATTGATCCTTCACTGAGGGGGAGTTATGCCTATGAATCAATGAATACTGCAGTTCAGATTACCATCAATTGTCTCTCTAAGGTTTCTAGTAAGCGTCCTTCAATAGAGGATGTTCTCTGGAATTTACAGTATTCAATGCAAGTTCAAGAGTCTTGGACTAGCAGTGGGAATCTCAGCACAAAATTTTAA 2145 0.3748 MNLFPAITLVFVLLIPSSLAQLSQTETRILFQVQKLLEYPQVLQGWNNWTNFCFLPPSPSLIIVCSNGRVTELTIIGNRTSPSSHSSEPFQALSGTFSTDSFFTVLTKLSNLKILSLVSLGLWGPLPEKINRFSSLEILNISSNFISDEIPRSISSMKNLKSVVLADNLLNGSVPDLKSLASLEEVNLDGNKLGPEFPSIGNNIVKIILRKNSITSQIPLDLSNFEKLQIFDVSSNNLIGRIPISIFSLPSLHYLNLSSNKLSGNLTTNSRCSSSSSLNYVDISRNFLVGKLPSCMVKSKAKVLYSWNCLSTKSSNAEQHSLSYCKKDAALAVRPPKRKVEKGSSMKLGLVLVIVGGVVGIACVLALIIVFVLWRAKPERLNHSMDRSVAHKVSEKSNMNARHVPQTMRLGTHGQPPYNIFTEEEIEDATNNFDQSNLIGEGSQGQIYKGWLRNGSVVLINCIKIKQKGLPHSIMQQLDVLQNLRHRHMVSVLGHCLITHQDPPQVTSTVFIVHEYISNVSLRDQLTDGKKKDMLKWPQRMAISIGIARGVQFLHTGVAPGVFGNNLKIENILLDDSLNAKVSGYRIPLPSKSTVNEQSDAEKEKEDIYQLGVILLEVITGRQIASSSEVEQLKDELERSSSEPPSSILRSTIDPSLRGSYAYESMNTAVQITINCLSKVSSKRPSIEDVLWNLQYSMQVQESWTSSGNLSTKF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi630g00011 714 Gene3D Ribonuclease Inhibitor 204 328 IPR032675 -
Vivi630g00011 714 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 204 695 - -
Vivi630g00011 714 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 406 506 - -
Vivi630g00011 714 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 23 202 - -
Vivi630g00011 714 Gene3D Transferase(Phosphotransferase) domain 1 598 709 - -
Vivi630g00011 714 Gene3D Transferase(Phosphotransferase) domain 1 517 597 - -
Vivi630g00011 714 ProSiteProfiles Protein kinase domain profile. 433 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi630g00011 714 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 517 710 - -
Vivi630g00011 714 SUPERFAMILY Protein kinase-like (PK-like) 413 694 IPR011009 -
Vivi630g00011 714 SUPERFAMILY L domain-like 67 297 - -
Vivi630g00011 714 Gene3D Ribonuclease Inhibitor 23 203 IPR032675 -
Vivi630g00011 714 Gene3D Phosphorylase Kinase; domain 1 391 516 - -
Vivi630g00011 714 Pfam Leucine Rich Repeat 135 156 IPR001611 GO:0005515
Vivi630g00011 714 Pfam Protein tyrosine and serine/threonine kinase 436 630 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi630g00011 18 634 Miscellaneous Gene Families AT2G02780 49.616 1.93e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vivi630g00011 PK_Tyr_Ser-Thr 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi630g00011 - - cam:101490224 1073.92