LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi625g00007	ATGTTAGTCAGAGTGCGTGGCGGAGAATATAGATGTCTCATAAGACTTGTGTGGAAAATCGATTGTTATCGAAGGATACATTTACGAAGTATATTGCAATTTAATGTGAAACATAATTCAATGGCTTTAGTTGATGGTGTAGTACATCTTAGGTTTCTTTTGTTCTATCATTTAATTTTGCTCCTGTTACTTATCTTAACTAGCAAAGGAAGTGGACATAGTGATGATTGTCCCGTCTCATTTGATTGTGGAAATCTTGGGTTTATTGGCTACCCTTTTACCAAAGTTGGATTCCCAAACTGTGGTGCATTGGCAATTCGAGGTTGTGATGATCACAACAAAGCTGCTGTGAAAAGCATCCAATTAACCAAAGGAGGAAAACCATTTCAAGTTACAAAGATTGTTAATTACTTTTTCAAGGGAAACCCTATTTCCATTATTGATCAGAACTTCATGAACCTTTTGATGAAGAGTGCTTGTGATGTCTTCACCTATGTTAACATTACTATCCCTCCCCCCTCTCCTTTTGGAACTCTTTATATGAAAGACAATATAACTGCTTTCAAATGCAATCGTACCCAAAAACTAATCACCAACCCTCCAAGTAATTTCTTCAAAAATAGTTCTTGTCCGAACTATGATTTTTATTTCGGTGATTCAATATCCGATGGTGAGTCTAATCCCACTTTCACGTCATGCTCGTTATTTCATCTTCCTGTCATTGGATTAGGCTTTGCACTTTCTGGTAACCCGTATCCGTTATTAGCTCATGAAATTACCTATCAGTTTCAACTTTCTGAAGAGTGCATACGGTGTCACCGTGATACAAAAGGTCATTGTCGTGCTCACAACAACGGACAAATTTATTGCCCAGGTAATGCATTAACAAAACTTCCAGAAATAGTTAAGATGAAGGGTAGAAGTTCAAATTGGAAGCTACGATTGGTTTCAGCTGTTGTGGTTGTGGTAGCTATTGGAGTTGGAGTGCTTATGTTATTGGCATATTGCATTAAGAAAAAGATCGTCCCTGCAGCATTTCTTTTATTCAGGAAGAAGAGTTCAACCAATCAAATTATTGAGGATTTTTTGAAAGAACATGGACATCTTCCAGCGGCTAGGTATAGTTATTCAGATGTCAAGAAAATAACAAACTCTTTTAGAAACAAATTAGGCCAAGGAGGGTTTGGAAGTGTATACAAAGGGAAGTTACATGATGAACGTGTTGTTGCAGTGAAGGTTTTAAGTGAATCAAAAGGTAATGGTGAAGATTTTATCAATGAAGTTGCAAGTATCAGTAGAACTTCGCATGTCAACATTGTTAGACTTTTGGGATTCTGTTTGGATGGTTCTAAAAAGGCACTAATATATGAATTCATGTCTAATGGATCTCTTGAGAAGTTCATATATGAGGAGAAAAATGCATTGAAGGATGATCACCAATTGAATTGCAAAATACTGTATGATATTGCAGTTGGTGTTGCTCGGGGACTAGAGTACTTGCATAGAGGTTGCAACACCAGAATCTTACATTTCGACATAAAACCTCATAATATATTACTTGATGAGGATCTATGTCCGAAAATTTCAGATTTTGGACTTGCTAAAATATGTCTAAAAAATGAAAGCATTGTATCCGTATTTGGTGCAAGGGGAACACCGGGATATATTGCTCCAGAGTTGTTCTCTAGAAATTTTGGTGGGGTGTCACATAAATCAGATGTCTATAGTTATGGAATGATGGTTTTAGAAATGGTTGGTCGAAGAAAGAACATCAAAGTTGAAGTGGATTGTTCTAGTGAGTTATATTTTCCACACTGGATTTATAAACGTCTTGAATTGAATCAGGATCTTGGACTTAAGTGTGTTAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGCTTATGGTGCATACAAACTGACCCTTCAAATCGACCATCAATGCGTAAAGTGGTGGAAATGTTGGAAGGGAGCCTTCAAGTGCTGGAAATACCGCCGAAACCCTTTTTGTCTTCTCCTTCAACATCTTCAATCCATGTTTCATCTGAAATGTTGTAG	2070	0.3681	MLVRVRGGEYRCLIRLVWKIDCYRRIHLRSILQFNVKHNSMALVDGVVHLRFLLFYHLILLLLLILTSKGSGHSDDCPVSFDCGNLGFIGYPFTKVGFPNCGALAIRGCDDHNKAAVKSIQLTKGGKPFQVTKIVNYFFKGNPISIIDQNFMNLLMKSACDVFTYVNITIPPPSPFGTLYMKDNITAFKCNRTQKLITNPPSNFFKNSSCPNYDFYFGDSISDGESNPTFTSCSLFHLPVIGLGFALSGNPYPLLAHEITYQFQLSEECIRCHRDTKGHCRAHNNGQIYCPGNALTKLPEIVKMKGRSSNWKLRLVSAVVVVVAIGVGVLMLLAYCIKKKIVPAAFLLFRKKSSTNQIIEDFLKEHGHLPAARYSYSDVKKITNSFRNKLGQGGFGSVYKGKLHDERVVAVKVLSESKGNGEDFINEVASISRTSHVNIVRLLGFCLDGSKKALIYEFMSNGSLEKFIYEEKNALKDDHQLNCKILYDIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDEDLCPKISDFGLAKICLKNESIVSVFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLKCVKNEIDEEMVRKMTVVSLWCIQTDPSNRPSMRKVVEMLEGSLQVLEIPPKPFLSSPSTSSIHVSSEML	689

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi625g00007	689	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	508	520	IPR008271	GO:0004672\|GO:0006468
	Vivi625g00007	689	SUPERFAMILY	Protein kinase-like (PK-like)	367	660	IPR011009	-
	Vivi625g00007	689	SMART	serkin_6	384	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi625g00007	689	ProSiteProfiles	Protein kinase domain profile.	384	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi625g00007	689	Pfam	Protein kinase domain	388	657	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi625g00007	689	FunFam	PR5-like receptor kinase	459	671	-	-
	Vivi625g00007	689	ProSitePatterns	Protein kinases ATP-binding region signature.	390	412	IPR017441	GO:0005524
	Vivi625g00007	689	Gene3D	Phosphorylase Kinase; domain 1	360	458	-	-
	Vivi625g00007	689	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	356	679	IPR045874	GO:0004672
	Vivi625g00007	689	Gene3D	Transferase(Phosphotransferase) domain 1	459	673	-	-
	Vivi625g00007	689	FunFam	S-receptor-like serine/threonine-protein kinase	352	458	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi625g00007	373	675	Receptor kinase-like Gene Family	AT4G18250	61.736	1.99e-126	389

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Vivi625g00007		Pkinase	9.9e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi625g00007	-		-	vvo:131634171	1362.44