Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi625g00004 ATGTCTTTAGTTTATACAGTAGTACATGATAGGTTCCTTAAGTTCTCTCATTTAACTCTACTACTGTTACTCATCTTAACTAGCAAAGGAAATGGACACAGTGATGATTGTCCAGACTCATTTGATTGTGGAAATCTTGGGCTTCTTCGCTCTCCTTTCACCAAAGTTGGATTTCCAAACTGTGGTGCATTGGCAATTCAAGGTTGTGATGATGTTAACAAAACTTCTATGAAGCATGTCCAGTTAACCAAAGGAGGAAAACTCTTTCAAGTTACAAACATTGTTTATGACCCATCCAAGGGAAACACTATTTCCATTATTGACCAGAATTTCAACCACCTTTTGATGAAAAGTGCTTGTGAAGTCTTCACCTATGTTAATATTATCCTCCCTTCTCCTTCTCCTTTTGGAACTTTTTATATGAAAGACAATATAACTGCTTTCAAATGCAACCGTACCCAAAAATTAGTCACCATTCCTCCAAATAATTTTTTCATGAACAGCTCTTGTCCGAAATATGATTTTTATTTCGGTGATTCAATATCAGATGGTGAGTCCAATCACTCTTTCACGACGTGTTTTTTGCTTTATCTTCCTATCGTTGAGTTAGGCTTTGCACTTTCTGGAAATCCATTTCCATTCTTAGCTCATGAAATTACCTTTAAATTTCAACCTTCGGATGAGTGTGAACGGTGTCACCATGATGCAAAAGGTCATTGTTATGCTCGCAACAACAGACAAATTTATTGTGCAAGGAAACATAGAAGTCCTCCATCTTGGAAGCTTCCATTGGTTTTAGGAGTCGGTGTAGGACCATGGATCATAGTTGGATTGTTCCTCACGCTACGGTATTTCAAACGGAAATATGACTCTGCATGCATCCAACTCCAACCAAGTAACAACGCTTTTGTTGATCCTCATCCAAATCGTGAATCAGAGTCAAACAAGCTCTTCTTTGGTATACCTGTCTTCTCTTATGAAGAGCTTCAACAAGCAACAAACAATTTCGACAGCACTAGAACGCTAGGAGATGGAGGTTTTGGCACTGTGTACTACGGGAAACTCAAAGATGGAAGGGAGGTAGCTGTGAAAAGATTATTTGAGCACAATTACAGAAGAGTAGATCAGTTTGTGAATGAAATTGAATTACTCGCTCGCTTGCGCCATAGGAATCTGGTTTCCCTCTATGGCTGCACTTCGCGTCACAGTCGCGAGCTACTCCTTGTATATGAATACATTCCAAATGGAACTGTTGCTAGCCATCTCCATGGTGATTTAGCTAAGGCCGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCAATAGAAACTGCTTCTGCGTTGGCTTATCTACACGCTTCCGACATCATTCATCGAGATGTCAAAACCAACAACATTCTACTTGACACTAACTTTTCTGTTAAGCTAGCAGATTTTGGACTGTCGAGGTTGTTCCCGAATAATGTCAGCCATGTTTCCACTGCTCCACAAGGAAGTCCGGGTTACCTTGACCCTGAATATTTCCAACTCTACAAGCTCTCAGTGAAGAGTGATGTCTATAGTTTTGGTGTAGTGCTCATCGAGCTAATATCGTCTATGACAGCAATTGATTCTGCTAGAGAAAAAGAGGAAATAAACTTGGCGAATCTAGCGGCTAAAAAGATAAGAAAAGGTGCAATTGGGGAGCTGGTTGATCCATCACTTGGGTTTGAATCAGATAGTGAAGTTAAAAGGATGGTATCTTCAGTGGCTGAATTGGCTTTTCAGTGTGTGCTAGGAAACATGGAGTTGAGACCTTCCATGGATCAAGTTCTGCAAGAACTCAAGAAAATTGATGGTGGGAATTTTGAGTTTGTTCATCTAGAGAAAATGCGTGATTTTGTCGAGTCCTCGCACTCGGAAGAAATACACCCATCATTAAATGAAACTTCTTTGAATAAAAAGCAAGTATCTTCTTCACCAAAGTCATTGACTGAGAAATGGGAAAGTGAATCTACTACTCCCAATGCCAGTGGTTAA 2019 0.3992 MSLVYTVVHDRFLKFSHLTLLLLLILTSKGNGHSDDCPDSFDCGNLGLLRSPFTKVGFPNCGALAIQGCDDVNKTSMKHVQLTKGGKLFQVTNIVYDPSKGNTISIIDQNFNHLLMKSACEVFTYVNIILPSPSPFGTFYMKDNITAFKCNRTQKLVTIPPNNFFMNSSCPKYDFYFGDSISDGESNHSFTTCFLLYLPIVELGFALSGNPFPFLAHEITFKFQPSDECERCHHDAKGHCYARNNRQIYCARKHRSPPSWKLPLVLGVGVGPWIIVGLFLTLRYFKRKYDSACIQLQPSNNAFVDPHPNRESESNKLFFGIPVFSYEELQQATNNFDSTRTLGDGGFGTVYYGKLKDGREVAVKRLFEHNYRRVDQFVNEIELLARLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVASHLHGDLAKAGLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDTNFSVKLADFGLSRLFPNNVSHVSTAPQGSPGYLDPEYFQLYKLSVKSDVYSFGVVLIELISSMTAIDSAREKEEINLANLAAKKIRKGAIGELVDPSLGFESDSEVKRMVSSVAELAFQCVLGNMELRPSMDQVLQELKKIDGGNFEFVHLEKMRDFVESSHSEEIHPSLNETSLNKKQVSSSPKSLTEKWESESTTPNASG 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi625g00004 672 ProSiteProfiles Protein kinase domain profile. 336 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi625g00004 672 Gene3D Phosphorylase Kinase; domain 1 308 412 - -
Vivi625g00004 672 MobiDBLite consensus disorder prediction 637 672 - -
Vivi625g00004 672 Pfam Protein kinase domain 338 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi625g00004 672 Gene3D Transferase(Phosphotransferase) domain 1 413 616 - -
Vivi625g00004 672 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 308 412 - -
Vivi625g00004 672 MobiDBLite consensus disorder prediction 630 672 - -
Vivi625g00004 672 SUPERFAMILY Protein kinase-like (PK-like) 318 612 IPR011009 -
Vivi625g00004 672 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi625g00004 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Vivi625g00004 672 FunFam Wall-associated receptor kinase-like 20 413 620 - -
Vivi625g00004 672 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Vivi625g00004 672 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 666 IPR044652 GO:0004672
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi625g00004 37 672 Receptor kinase-like Gene Family AT1G25390 44.376 4.28e-161 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi625g00004 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi625g00004 - - gmx:100778085 775.007