LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi625g00001	ATGTTCAAGTCAACCAACTATATCATATTATATCATACTTGGCTTATATTAACAATTTTTTTAGCTCATAAACGTATTGGTTGGTTATTCATGATGGCCTTAGTTTACAAAACTTTGTTCCTTTTGTTTTCTCACCTCATGCTACTTGGTAATGGGTACCAAAATAATTGTCCAGCTTCATTTAGTTGTGGATTCCTAGGCAATATCAGTTTCCCTTTCACTACAACACAACGCCAGGATTGTGGCTTATTGCCAATACATAATTGTGATGATGCTCCAGGGAAGCCCAAAACGATCCAATTTCAGGATAAAGGGAAACAGTTTGATTTTGAGGTGGAAAAGGTAAGTCCTCTTGAGCATCACGGTAGTAATGCAACTTGTAGTTGTGTTTTCAGAGACGATAATCTCTACCAACTTCTACAAAGCAAAAATTGCAAAGCTTTCAGATATAACTATACTCTTCCTCCAACCTCTCACTTTGTTTCTTTACATATAGAAACTCATGCAACCTTGTTCATGTGCAACCGTACCCTCCATATAAACTCGCCGAAATATATGCATAAGTATACAAGCTGCCCTCTCTATGATTTCTACTATCAGCCTGTTAATAGCGCTCAGAATGTATCTCCGAGTGCTTTTACAGCTTGTACAAATGCCCTGCTTCCGGCTAAAGACGTTGCAGACTCTGGCAACCCTTTTAATTTCATAACTTCTGACATTATAATTCAAGTAAAGGTAACAGAGGAATGTGCAAGTTGTCACTACAACCAAAGAGGACGGTGTCAACTTGACAGCAACGGAAGGTTTTATTGTGCCAACCGTATTCAAGCAAACACCCCGAAAAAAGCTACGGTTGCAAAGCGAAAAGGGCTGAGACGAAATGTTAAACTTGGTATAGCAATCATGGTGACCATTGGAGTTGCAGTGCTGATGTTGTTGGCTTATTGTTTAAGGACAAAAATCTTCCCTCCAACATTTCTTTTGTTCAGGAAGAAAAATTCAACCCATCGTATCATTGAGGAGTATTTGAAAGAACATGGATCCCTTCCTGCTGCTGCCAGGTACAATTATTCAGATATAAAAAAAATAACAAACTCTTTCGAAAACAAATTAGGCCAAGGAGGGTATGGGAGTGTATACAAAGGGAAGTTACATGATGAGCGTCCTGTTGCAGTAAAGATTTTAAGTGATTCAAAAGGTGATGGTGAAGATTTTTTAAATGAAATTGCGAGTATAAGTAGAACTTCGCATGTCAACGTTGTTAGACTTTTGGGGTTCTGTTTGGAGGGTTCTAAAAAAGCACTAATATATGAATTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAAATCCACTGCGGAACGATCTCCAATTGGATTGCAAAACATTGTATGAGATTGCAATTGGCATTGCTCATGGATTAGAGTACTTGCACAGAGGCTGCAACACTAGAATATTACATTTTGACATAAAGCCTCATAATATACTACTAGATGCTGATTTTTGTCCAAAAATTTCTGATTTTGGACTTGCCAAAATATGTCCAAGAAAAGAAAGCATTGTATTCATATCCGGCGCGAGAGGAACACCTGGATATATTGCCCCTGAGTTGATTTTCAGAAATTTTGGAGGCACCTCACATAAATCAGATGTCTATAGTTATGGAATGATGGTTTTAGAGATGGTTGGACAAAGAAAGAACATTAAGGTTGAAGTTGATTGTTCTAGTGAGTTATACTTTCCACACTGGATTTACAAGCGTCTTGAATTGAATCAAGATCTTGGACTTAGGTGTATTAACAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCAGTCCTTCGAATCGACCATCTATGCATAAAGTGGTGGAAATGTTGGAAGGGAACCTTCAAGTGTTGGAAATGCCACCCAAACCATTTTTGTTTTCTCCTTCAGTTTCTTCAACCAATCTGACTGAAATATTATAA	2010	0.3761	MFKSTNYIILYHTWLILTIFLAHKRIGWLFMMALVYKTLFLLFSHLMLLGNGYQNNCPASFSCGFLGNISFPFTTTQRQDCGLLPIHNCDDAPGKPKTIQFQDKGKQFDFEVEKVSPLEHHGSNATCSCVFRDDNLYQLLQSKNCKAFRYNYTLPPTSHFVSLHIETHATLFMCNRTLHINSPKYMHKYTSCPLYDFYYQPVNSAQNVSPSAFTACTNALLPAKDVADSGNPFNFITSDIIIQVKVTEECASCHYNQRGRCQLDSNGRFYCANRIQANTPKKATVAKRKGLRRNVKLGIAIMVTIGVAVLMLLAYCLRTKIFPPTFLLFRKKNSTHRIIEEYLKEHGSLPAAARYNYSDIKKITNSFENKLGQGGYGSVYKGKLHDERPVAVKILSDSKGDGEDFLNEIASISRTSHVNVVRLLGFCLEGSKKALIYEFMPNGSLEKFIYEEKNPLRNDLQLDCKTLYEIAIGIAHGLEYLHRGCNTRILHFDIKPHNILLDADFCPKISDFGLAKICPRKESIVFISGARGTPGYIAPELIFRNFGGTSHKSDVYSYGMMVLEMVGQRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLRCINNEIDEEMVRKMTVVSLWCIQTSPSNRPSMHKVVEMLEGNLQVLEMPPKPFLFSPSVSSTNLTEIL	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi625g00001	669	ProSiteProfiles	Protein kinase domain profile.	365	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi625g00001	669	FunFam	serine/threonine-protein kinase PBS1-like	334	439	-	-
	Vivi625g00001	669	Gene3D	Phosphorylase Kinase; domain 1	339	439	-	-
	Vivi625g00001	669	Pfam	Protein kinase domain	368	638	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi625g00001	669	SUPERFAMILY	Protein kinase-like (PK-like)	350	641	IPR011009	-
	Vivi625g00001	669	ProSitePatterns	Protein kinases ATP-binding region signature.	371	393	IPR017441	GO:0005524
	Vivi625g00001	669	SMART	serkin_6	365	647	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi625g00001	669	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	336	659	IPR045874	GO:0004672
	Vivi625g00001	669	FunFam	PR5-like receptor kinase	440	652	-	-
	Vivi625g00001	669	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	489	501	IPR008271	GO:0004672\|GO:0006468
	Vivi625g00001	669	Gene3D	Transferase(Phosphotransferase) domain 1	440	649	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi625g00001	33	653	Receptor kinase-like Gene Family	AT5G38260	39.314	2.20e-126	386

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Vivi625g00001		Pkinase	7.8e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi625g00001	-		-	vvo:131610174	815.839