Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi616g00003 ATGGAGGGTGGAAACCGACCTGAAGCTGAGCGATGGCTTTACACAGCCAACAAGCTTCTAAGCGCGCGTGATCTACACGGCGCACGTTCCTTCGCAATACGTGCACGAGAGTCCGACCCGACTTTCGATGCCTCCGAGCTTCTCCTAGCTGTGATCGATGTTCTGTTAGCCGGAGAATCGCGGATCAATGATCACCACCGTGATTGGTACGGGATCCTTCAAATCATCCGCTACTCCACCAATATCGATCACATCGCTAACCAGTATCGCCGCCTCGCTCTCCTCCTTGACCCGAACCGGAACCCGTTCGCTTTCTCCGGTCATGCTTTCTCTCTCGTTCATGATGCTTGGTCCGTTCTCTCCAATACGGCTAAGAAGGCTATGTACGATAGCGAGCTGCGGTTGCTCACTACACCAACTGTTCCGCCTCAGCCGCAGATTCAGCCTCGACCTGCTCCACAACCGGTGCCACAGTATCAGCAGCCTCAGCACCCTCAACCAACGCCGAAGAAAAATCCTAGACCGAGAGACGGCGTGGGTGCTGGTGCAGGTGCGACTGAACCGATTCGACAGACACCGAATCGGAACCCTAGCGAGCCTGCTGAGTCGACTCGGCAGACTCGGACTGCGAGTGCTGCTGAAACGGAAGGTAACGTTAGCTTCTGGACTTTGTGTCCTTACTGTTACGTTTATTATGAGTATCCGAAGGGGTATGAAGAGTGTACCCTGCGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGTTCACCGCCGTTGAATGAGATAGATGCTTCGTTTTGCACTTGGGGATTTTTTCCGTTAGGGTTTTCTGGTGATTCTAAAGATGTGAGTGGGACTTCTTCCAATTGGAACCCGGTTTCTCCTCTGTTTCCTTGCTCCTTGAAAGGAGGATCGACGAGTAGGAAAAAAAATTGGGCTTACTATGATGAAGCGGCAACTGCGGCCTTCATCGATATTTCTGATCCGAGTGATGATGATTCTGATGATGGGGATTGGAGGGGTGGTGCTGGTAAGAAACGAGGGTCGAAGAGTTCGAACGTTACCAGGAGAAAGATTAGGAAAGATTCCGGTAATGCTAGTGGGAGAGAAACTGTGGAGAGACCTAGGAGGAGTGCTACTGGTGCTGCAGCAGGGAATGTGACTGAGAAGAATGTCGGTGCTGTTGATGCTTCTGGTGCAAAGGCAGAAGCTAGTAAGAAAGCTGCGCCGGGTAGTTCCAAAAAGAATGTGGCTGTAAACATGGGGAAGTTGGATTTGAATGTTGAGTGCAGTAACGAGGCGGAAGAGCCTTCCCGTGGAGCCCGTGACCGTGAAGGGAATGCAACTGGCAATGCTGAGGATAATATTGAAGGAATTGGGTTTTTTGAGGGTCTTGATGAGTTCCTCAGTAGCTTACCCATTCTTAATGCGGTGGCAGATGATAAGGTTAAGGATCATTAG 1470 0.5129 MEGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDVLLAGESRINDHHRDWYGILQIIRYSTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNTAKKAMYDSELRLLTTPTVPPQPQIQPRPAPQPVPQYQQPQHPQPTPKKNPRPRDGVGAGAGATEPIRQTPNRNPSEPAESTRQTRTASAAETEGNVSFWTLCPYCYVYYEYPKGYEECTLRCQSCRRGFHAVVIRSPPLNEIDASFCTWGFFPLGFSGDSKDVSGTSSNWNPVSPLFPCSLKGGSTSRKKNWAYYDEAATAAFIDISDPSDDDSDDGDWRGGAGKKRGSKSSNVTRRKIRKDSGNASGRETVERPRRSATGAAAGNVTEKNVGAVDASGAKAEASKKAAPGSSKKNVAVNMGKLDLNVECSNEAEEPSRGARDREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKDH 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi616g00003 489 MobiDBLite consensus disorder prediction 329 391 - -
Vivi616g00003 489 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 366 - -
Vivi616g00003 489 Pfam DnaJ domain 68 130 IPR001623 -
Vivi616g00003 489 Gene3D DnaJ domain 57 139 IPR036869 -
Vivi616g00003 489 SUPERFAMILY Chaperone J-domain 64 134 IPR036869 -
Vivi616g00003 489 MobiDBLite consensus disorder prediction 433 453 - -
Vivi616g00003 489 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Vivi616g00003 489 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Vivi616g00003 489 MobiDBLite consensus disorder prediction 142 169 - -
Vivi616g00003 489 MobiDBLite consensus disorder prediction 433 457 - -
Vivi616g00003 489 CDD DnaJ 68 122 IPR001623 -
Vivi616g00003 489 MobiDBLite consensus disorder prediction 189 213 - -
Vivi616g00003 489 SMART dnaj_3 67 125 IPR001623 -
Vivi616g00003 489 MobiDBLite consensus disorder prediction 138 213 - -
Vivi616g00003 489 MobiDBLite consensus disorder prediction 358 379 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi616g00003 8 487 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 40.400 5.12e-97 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi616g00003 - - cam:101509006 693.73