LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi60g00013	ATGACCAAACATTTCAAGCATAAGTTAGGTGAAGGAGGTTATGGTACTGTCTACGAAGGAGTGCTTCAGAGCAAACGTAGAGTAGCTGTTAAGGTATTGACTAAGTCTCAAACCAATGGACAAGACTTTATCAATGAAGTTGCAACAATTGGAAGAATTCGTCATGTCAATGTGGTTGAGCTAATCGGATTTTATGCTGAAAGAACAAAGCAAGCTCTGGTCTACGAGTTTATGCCTAATGGTTCTCTTGATAAATACTCGTTTTCGCAAGAGCAAGGAAACTCATCTTCATTAGGATACGATAAAATCTATGACATTTCGCTTGAAATTGCTCGTGGAATTCAATACTTACACCAAGGTTGTGACATGCAAATCTTACACTTTGATATAAAACCTCATAACATTCTTCTTGATGAGAATTTCAACCCAAAAATATCTGATTTTGGTTTGGCAAAATTGTATCGAATAGATCAAAGCATTCTAATTTTAACTGCAGTAAGAGGAACAATGGGTTACATGGCTCCTGAGTTGTTGTACAAGAACCTTGGAAGCTTATCTATTAAAGCTGACGATTTTAGTTTTGGAATGATGCTAATGGAAATGACAGGTAAAAAAAAGAACAAAAATTATATAGAAAATTGTTGGCAAGACTACTTTCCTAAGTGGATTTATGATCAGTTTGAGGAAACAATAGATACAAACAACGGAACCCAGGAGGAAAAGAATATTGCAATGAAGATGATTGTGGTTGCCTTGAAATGCATACAAATGAAACCTGATGATCGGCCCTCAATGAATGAAGTGATAGAAATGCTTGAAGGAGATGAAGTTCCTCAACACCTTCCACTTGATCCACAATCTCTTACAAGAGTTTTTTTTGGCTCTCAAAGCCTGTGA	897	0.3634	MTKHFKHKLGEGGYGTVYEGVLQSKRRVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVELIGFYAERTKQALVYEFMPNGSLDKYSFSQEQGNSSSLGYDKIYDISLEIARGIQYLHQGCDMQILHFDIKPHNILLDENFNPKISDFGLAKLYRIDQSILILTAVRGTMGYMAPELLYKNLGSLSIKADDFSFGMMLMEMTGKKKNKNYIENCWQDYFPKWIYDQFEETIDTNNGTQEEKNIAMKMIVVALKCIQMKPDDRPSMNEVIEMLEGDEVPQHLPLDPQSLTRVFFGSQSL	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi60g00013	298	ProSiteProfiles	Protein kinase domain profile.	3	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00013	298	Gene3D	Transferase(Phosphotransferase) domain 1	82	280	-	-
	Vivi60g00013	298	FunFam	PR5-like receptor kinase	78	282	-	-
	Vivi60g00013	298	Gene3D	Phosphorylase Kinase; domain 1	3	81	-	-
	Vivi60g00013	298	ProSitePatterns	Protein kinases ATP-binding region signature.	9	31	IPR017441	GO:0005524
	Vivi60g00013	298	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	125	137	IPR008271	GO:0004672\|GO:0006468
	Vivi60g00013	298	PIRSF	ILK	4	280	-	-
	Vivi60g00013	298	Pfam	Protein kinase domain	5	270	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00013	298	SUPERFAMILY	Protein kinase-like (PK-like)	5	273	IPR011009	-
	Vivi60g00013	298	SMART	serkin_6	3	272	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00013	298	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	1	281	IPR045874	GO:0004672

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi60g00013	1	285	Receptor kinase-like Gene Family	AT5G38280	50.340	3.18e-95	293

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Vivi60g00013		Pkinase	2.6e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi60g00013	-		-	tpra:123914142	513.842