LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi60g00012	ATGGCTGTGTCTTGCGGGGGACTAATCATTTTGATTGCCTCTGCAATAATAATAATTGGGTATGTCTTGGAAATTCCGTACCCTCCTTCATGCCCCATTCCATTAGAACAACCCTGCGGAATAGTATACAACAAATCTTCAATTTCCTTCGGAGAGGGCTGTGGAACTCCCAGTTTCGAAGTAATATGTGAAAACAACAAATCAGTAATTTACTTCAACTATGGCAAACGTCTCGCCAAAGCCATTATAGCCTCTCCAAATTCCTCCTCATTCCTTTACATCATGACTGGAGTTAGTTCTGATAATAACTTCCCTACCATCCACTCTTTTTCTCTTCCGTATGAAAACGTCTCATTCTTGACATATCTTGATGTAAAGCAATTTATAACTGTTTTGAGATGCGAAAAACCAGTAGATGGTGACTGGTACTGGGGTATTTCTTCAGAGAGTTGTGTTGGTGGAATTGATGTTGATGAGGAAAATCAATATTCTTATTTATATGGTGTAGATGATTCTTTTGAATCAGAAGTGAGAGATATAGAAGAGTCATGCAGAATAGAGATGAAGGTAGTGATTAGTTGGTGGGATGGAAAGGTGAAATGTAATAACAAATATCCAGAAGTTGAAACTGAGTATGTGACTGGAATTGAGCTTCGTTGGCGACCAATAAGCTGTGAGGGAGACAGCGAGGAACAACCATTGCCACTCACCTGCACTCTCTTAAATGCAGCAGTTGGCCAATTCCCATTTTTCCTACTTATATCATTATCCTTTAGCATTGTTGGAAAATTTGTTCTTGGCTCACCCTTTGTGATTGCGGTTTTGATATCTAAATGGAGAAAAAAACATTTATCCATATATGACATGGTTGAAGATTTCATCCAAAGTCACAACAACTTCATACCCATTCGATACTCTTATTCTCAAATCAAAACGATGACCAAACATTTCAAGCATAAGTTAGGTGAAGGAGGTTATGGTACTGTCTACGAAGGAGTGCTTCGGAGCAAACGTAGAGTAGCTGTTAAGGTATTGACTAAGTCTCAAACCAATGGACAAGACTTTATCAATGAAGTTGCAACCATTGGAAGAATTCGTCATGTCAATGTGGTTGAGCTAATCGGATTTTGTGCTGAAAGAACAAAGCAAGCTTTGGTTTACGAGTTTATGTCTAACGGTTCTCTTGATAAACACACGTTTTCACAAGAGCAAGGAAATTCTTCTTCATTAGGATACGATAAAATCTATGTCATTTCGCTTGGAATTGCTCGTGGAATTCAATACTTACACCAAGGTTGTGACATGCAAATCATACATTTTGATATAAAACCTCATAACATTCTTCTTGATGAGAATTTCAACCCAAAAATATCTGACTTTGGTTTGGCAAAATTGTATCGAATAGATCAAAGTATTTTAACTTTAACAGCAGCAAGAGGAACAATGGGTTACATGGCCCCTGAATTGTTATACAAGAACATTGGAAGCATATCTCATAAAGCCGACGTTTTTAGTTTTGGAATGATGCTAATGGAAATGGCAGGTAAAAGAAAGAACAAAAATTATATAGAGAATTGTTGGCAAGACTACTTTCCTAAGTGGATTTATGATCAGTTTGAGGAAACAATAGACACAAACAACGGAACCCAGGAGGAAAAGAATATTGCAATGAAGATGATTGTGGTTGCCTTGAAATGCATACAAATGAAACCTGATGATCGGCCTTCAATGAATGAAGTGATAGAAATGCTTGAAGGAGACGAAGTTCCTCAACACCTTCCACTTGATCCACAATCTCTATTAACTTGGGAGACGATGTCAACAGATGCACATGAATTCAATGGCAACTAA	1851	0.3771	MAVSCGGLIILIASAIIIIGYVLEIPYPPSCPIPLEQPCGIVYNKSSISFGEGCGTPSFEVICENNKSVIYFNYGKRLAKAIIASPNSSSFLYIMTGVSSDNNFPTIHSFSLPYENVSFLTYLDVKQFITVLRCEKPVDGDWYWGISSESCVGGIDVDEENQYSYLYGVDDSFESEVRDIEESCRIEMKVVISWWDGKVKCNNKYPEVETEYVTGIELRWRPISCEGDSEEQPLPLTCTLLNAAVGQFPFFLLISLSFSIVGKFVLGSPFVIAVLISKWRKKHLSIYDMVEDFIQSHNNFIPIRYSYSQIKTMTKHFKHKLGEGGYGTVYEGVLRSKRRVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVELIGFCAERTKQALVYEFMSNGSLDKHTFSQEQGNSSSLGYDKIYVISLGIARGIQYLHQGCDMQIIHFDIKPHNILLDENFNPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGSISHKADVFSFGMMLMEMAGKRKNKNYIENCWQDYFPKWIYDQFEETIDTNNGTQEEKNIAMKMIVVALKCIQMKPDDRPSMNEVIEMLEGDEVPQHLPLDPQSLLTWETMSTDAHEFNGN	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi60g00012	616	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	437	449	IPR008271	GO:0004672\|GO:0006468
	Vivi60g00012	616	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	289	594	IPR045874	GO:0004672
	Vivi60g00012	616	Pfam	Protein kinase domain	317	582	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00012	616	Gene3D	Transferase(Phosphotransferase) domain 1	390	592	-	-
	Vivi60g00012	616	ProSitePatterns	Protein kinases ATP-binding region signature.	321	343	IPR017441	GO:0005524
	Vivi60g00012	616	SMART	serkin_6	315	584	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00012	616	FunFam	serine/threonine-protein kinase PBS1-like	287	389	-	-
	Vivi60g00012	616	SUPERFAMILY	Protein kinase-like (PK-like)	295	585	IPR011009	-
	Vivi60g00012	616	ProSiteProfiles	Protein kinase domain profile.	315	595	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00012	616	Gene3D	Phosphorylase Kinase; domain 1	291	389	-	-
	Vivi60g00012	616	FunFam	PR5-like receptor kinase	390	594	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi60g00012	304	597	Receptor kinase-like Gene Family	AT5G38280	50.825	1.69e-97	310

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Vivi60g00012		Pkinase	2.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi60g00012	-		-	tpra:123914142	855.129