LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi60g00010	ATGGCTGTGTCGTGCGGGGGACTAATCATTTTGATTACCTTTGTTATTTTGATATGTGTGTTTGTCTATGATTTTCCCGCACGTGGTTTATGCCCAATTCAATCAGATAATTTTTGCGGATTCATATTCAACGAATCTTCAAATCTATATGAATATGGGTGTGCGAATCCAAGTTTCCAAGTAATATGTGAAAACAATAAATCGGTAATTTACATCAACTATGGACAACATTATGCTAACGCCATTATAGCTTCTAACTCATCCTCCGCCTTCAGTTACATCATTACCGGAGTTAGTCCTGATTACTGCCCTATCATCAATTCCTATTCTCTTCCTTACGAAAACGTCTCATTCTTCACGAATTCTCGGGAATACAAAACAATTATGAGATGCAAAAAACCGGTAGATGATTTTGGTTATATGGATATTTCTTCAGAGATGTGTGGTGGTGGAATTGATGATGAGGAAAAGCAATATTCTTATTTATATGATGTTCATGGTTTTTTTGAACCAAGTGTGGCAAACATAGGAGAGTCTTGCAGAATAGATATGAAGATAATGATGAGTAGGTTTGATGGAGAGGTGAAATGTAGTACTAATAAAAAGTGTGGGTATCCAGAAAGTCACAGTGAATATCTGAATGGAGTTGAGATTCGTTGGCGACCATTACGATGTGTGGAAGACAGTGACTGGTACCGGGAAGTGGAACAACGATTGCCACTCCGCTGCATGCTCGCCGATGCAGCGCTCACCTGTCTTGCCATTGGAGGGATTCTGATCCCGTGGTTTCTTGTAAAATGTGTTTTTGGGTCGCCCGTTGTTGTTGCTATATTGATATTGATATGTAAATGGAGAAAAAAGCATCTATCCATATATGACACGGTTGAAGATTTTATCCAAAGTCATAATAATTTCATACCTACCAGATACTCTTACTCTCAAATCAAGTCGATGACCAAGCATTTTAAGCATGAGTTGGGTAAAGGGGCTTATGGTTCTGTCTATGAAGGAGAACTTCGCAGCAAACGCAAAGTAGCTGTTAAGGTATTGACTAAACCCCAAACCAATGGACAAGACTTTATCAATGAAGTTGCAACCATTGGAAGGATTCGTCATGTTAATGTGGTGCAACTAATTGGATTTTGTGCTGAAAGAACAAAACAAGCTCTGGTCTACGAGTTCATGCCTAATGGTTCTCTCGATAAACATACGTTTTCACAAGAGCAAGGAAACACATCTTCATTAAACTACCATAAAATCTACGACATTTCTCTTCGAATTGCTCGAGGAATACAATATCTACACCTAGGTTGTGACATACAAATCATACACTTCGATATTAAACCACATAACATTCTTCTTGATGAAAATTTTGACCCAAAGATATCAGATTTTGGTTTGGCAAAATTATATCAAATAGATCAAAGCATTTTAACTTTAACAGCTCCAAGAGAAACATTGGGTTACATGGCTCCTGGGCTATTGTACAAGAACATCGGAAGCGTATCTCACAAAGCTGACGTTTTTAGTTTTGGAATGATGCTAATGGAAATGGAAGGTAGAAAAAAGAACAAAAATTATATAGAGAATTGTTGGCAAGACTACTTTGCTAAATGGATTTATGATCAATTTGAGGAAACAATAGATACAAACAACGGAACAGAAGAGGAAAAGAATATTGCAATGAAGATGATTGTGATTGCCTTGAAATGCATACAAATGAAACCAGACGATCGTCCATCAATGAATGAAGTGATAGAAATGCTTGAAAGAGATGAAGTGCCTCAACACCTTCCACTTGATCCACAGTCTATGTTAACCTGGCAGACCATGTCAACAGATGCAAATGCATTTGATGACAACTAA	1866	0.3757	MAVSCGGLIILITFVILICVFVYDFPARGLCPIQSDNFCGFIFNESSNLYEYGCANPSFQVICENNKSVIYINYGQHYANAIIASNSSSAFSYIITGVSPDYCPIINSYSLPYENVSFFTNSREYKTIMRCKKPVDDFGYMDISSEMCGGGIDDEEKQYSYLYDVHGFFEPSVANIGESCRIDMKIMMSRFDGEVKCSTNKKCGYPESHSEYLNGVEIRWRPLRCVEDSDWYREVEQRLPLRCMLADAALTCLAIGGILIPWFLVKCVFGSPVVVAILILICKWRKKHLSIYDTVEDFIQSHNNFIPTRYSYSQIKSMTKHFKHELGKGAYGSVYEGELRSKRKVAVKVLTKPQTNGQDFINEVATIGRIRHVNVVQLIGFCAERTKQALVYEFMPNGSLDKHTFSQEQGNTSSLNYHKIYDISLRIARGIQYLHLGCDIQIIHFDIKPHNILLDENFDPKISDFGLAKLYQIDQSILTLTAPRETLGYMAPGLLYKNIGSVSHKADVFSFGMMLMEMEGRKKNKNYIENCWQDYFAKWIYDQFEETIDTNNGTEEEKNIAMKMIVIALKCIQMKPDDRPSMNEVIEMLERDEVPQHLPLDPQSMLTWQTMSTDANAFDDN	621

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi60g00010	621	Gene3D	Transferase(Phosphotransferase) domain 1	395	598	-	-
	Vivi60g00010	621	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	292	599	IPR045874	GO:0004672
	Vivi60g00010	621	ProSitePatterns	Protein kinases ATP-binding region signature.	326	348	IPR017441	GO:0005524
	Vivi60g00010	621	FunFam	Os07g0541700 protein	395	485	-	-
	Vivi60g00010	621	FunFam	serine/threonine-protein kinase PBS1-like	291	394	-	-
	Vivi60g00010	621	SMART	serkin_6	320	589	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00010	621	Gene3D	Phosphorylase Kinase; domain 1	295	394	-	-
	Vivi60g00010	621	Pfam	Protein kinase domain	322	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00010	621	SUPERFAMILY	Protein kinase-like (PK-like)	299	590	IPR011009	-
	Vivi60g00010	621	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	442	454	IPR008271	GO:0004672\|GO:0006468
	Vivi60g00010	621	ProSiteProfiles	Protein kinase domain profile.	320	600	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi60g00010	309	602	Receptor kinase-like Gene Family	AT5G38280	48.845	3.77e-92	296

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Vivi60g00010		Pkinase	7.4e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi60g00010	-		-	tpra:123914142	837.025