LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi60g00007	ATGACTGTGTCGTGCGGGGTACTAATCATTTTGATTGCCTTTGCAATAATGATAATTGTGTACTCCTTTGTCTTTAATTTGCGGGGCTTATCTTCATGCTTCTCTCCATTAGAACAGCCTTGCGAAATAGTATACAACAAATCTTCATTTTTTCTTGGAGAGGGCTGTGGAACCCCCGTTTTCGAAGTTATATGTGAAAACAACAGATCAGTAATTTACTTCAACTATGGCAAACGTCTCTCCAAAGCCATCATAGCCTTTCCAAATTCCACCTCATTCCGTTACATCGAGACTGGAGTTAGTCCGGATAATAACATCCCTATCATCAATTCCTTTTCTCTTCCGTACGAAAATGTCTCCTTCTTGACCTATCTTCGTGTAAAGGAATTTATAACTGTTATGAGATGCGAAAAACCAGTAGATGGTGACGGGTATTGGGATATTTCTCCTGAGAGTTGTGTTGATGAGGAAAAGCAATATTCATATTTATATGGTGTAGGTGATTCTTTGAAATCAGAAGTGAGAGATATAGAAGAGTCATGCAGAATAGAGATGAAGGTAGTGACGAGTTGGTGGGATGGAAAGGTGAAATGTAATAGCAAATATCCAGATGTTCAGACTGAGTATGTGAATGGAATCGAACATCGTTGGCGACCAATAAGCTGTGAGGGAGACAGTGAGGAACAACCAGTGCCACTCACCTGCACTTTCGTAAGCGCAGTTGCATACATATTCCTTCTGTTGCTATGGATTGTTGGAAAATTTGTTCTTGGCTCACCCTTTGTGATTGCGGTTTTGATATTTAAATGGAGAAAAAAACATTTATCCATATATGACAAGGTTGAAGATTTCATCCAAAGTCACAATAATTTCATACCCATTAGATACTCTTATTCTCAAATCAAAACGATGACCAAACATTTCAAACATAAGTTAGGCGAAGGAGGCTATGGTTCTGTCTACGAAGGAGTGCTTCAGAGCAAACGTAGAGTGGCTGTTAAGGTATTGACTAACTCTCAAACCAATGGACAAGACTTTATCAATGAAGTTGCAACCATTGGAAGAATACGTCATGTCAATGTGGTTGAGCTAATTGGATTTTGTGCTGAAAGAACAAAGCAAGCTCTGATCTACGAGTTTATGCCTAATGGTTCTCTTGATACACACACATTTTCACAAGAGCAAGGAAACTCGTCTTCATTAGGATACGATAAAATCTATGATATCTCGCTTGGAATTGCTTGCGGAATTCAATACTTACACCAAGGTTGTGACATGCAAATCATACACTTTGATATAAAACCTCATAACATTCTTCTTGATGAGAATTTCAGCCCAAAAATATCTGACTTTGGTTTGGCAAAATTGTATCGAATAGATCAAAGTATTTTAACTTTAACAGCAGCAAGAGGAACAATGGGTTACATGGCCCCTGAATTGTTGTACAAGAACATTGGAAGCATATCTCATAAAGCTGACATTTTTAGTTTTGGAATGATGCTAATGGAAATGACAGGTAAAAGAAAGAACAAAAACTATATAGAGAATTGTTGGCAAGACTACTTTCCTAAGTGGATTTATGATCAGTTTGAGGAAACAATAGATACAAACAACGTAACGCTTGAGGAAAAGAATATTGCAATGAAGATGATTGTGGTTGCCTTGAAATGCATACAAATGAAACCAGATGACCGACCCTCAATGAATGAAGTGATAGAAATGCTTGAAGGAGATGAAGTTCCTCAACACCTTCAACTTGATCCACAATCTCTATTAACATGGCAGACCATGTCAACAGATGCAGATGAATTCAATGACAACTAA	1824	0.3777	MTVSCGVLIILIAFAIMIIVYSFVFNLRGLSSCFSPLEQPCEIVYNKSSFFLGEGCGTPVFEVICENNRSVIYFNYGKRLSKAIIAFPNSTSFRYIETGVSPDNNIPIINSFSLPYENVSFLTYLRVKEFITVMRCEKPVDGDGYWDISPESCVDEEKQYSYLYGVGDSLKSEVRDIEESCRIEMKVVTSWWDGKVKCNSKYPDVQTEYVNGIEHRWRPISCEGDSEEQPVPLTCTFVSAVAYIFLLLLWIVGKFVLGSPFVIAVLIFKWRKKHLSIYDKVEDFIQSHNNFIPIRYSYSQIKTMTKHFKHKLGEGGYGSVYEGVLQSKRRVAVKVLTNSQTNGQDFINEVATIGRIRHVNVVELIGFCAERTKQALIYEFMPNGSLDTHTFSQEQGNSSSLGYDKIYDISLGIACGIQYLHQGCDMQIIHFDIKPHNILLDENFSPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGSISHKADIFSFGMMLMEMTGKRKNKNYIENCWQDYFPKWIYDQFEETIDTNNVTLEEKNIAMKMIVVALKCIQMKPDDRPSMNEVIEMLEGDEVPQHLQLDPQSLLTWQTMSTDADEFNDN	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi60g00007	607	FunFam	PR5-like receptor kinase	381	586	-	-
	Vivi60g00007	607	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	428	440	IPR008271	GO:0004672\|GO:0006468
	Vivi60g00007	607	SMART	serkin_6	306	575	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00007	607	Gene3D	Transferase(Phosphotransferase) domain 1	381	588	-	-
	Vivi60g00007	607	SUPERFAMILY	Protein kinase-like (PK-like)	286	576	IPR011009	-
	Vivi60g00007	607	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	278	590	IPR045874	GO:0004672
	Vivi60g00007	607	Gene3D	Phosphorylase Kinase; domain 1	281	380	-	-
	Vivi60g00007	607	Pfam	Protein kinase domain	308	573	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi60g00007	607	FunFam	serine/threonine-protein kinase PBS1-like	277	380	-	-
	Vivi60g00007	607	ProSitePatterns	Protein kinases ATP-binding region signature.	312	334	IPR017441	GO:0005524
	Vivi60g00007	607	ProSiteProfiles	Protein kinase domain profile.	306	586	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi60g00007	295	592	Receptor kinase-like Gene Family	AT5G38280	50.814	8.25e-99	313

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Vivi60g00007		Pkinase	7.9e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi60g00007	-		-	tpra:123914142	831.632