Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi60g00001 ATGGCTTCTCCCGGTGGAGCTTACTCATCTGGTACAAGCTCTCTTCAGAACTCTGGATCTGGATCAGAGGGAGATATGAATATGAATATGAATCAGAATCACATGCAGGTGAATATAACAGATCAAAAGAAGAGGAAGAGAATGCAATCCAACCGAGAATCAGCACGAAGATCAAGGATGAAGAAGCAGCAACACATGGAAGGTCTTAGCGCACAAATCGAAGAGCTGAAAAAAGAGAATAATCAAATAACCACAAACGTAGGGATAACTACTCAGATGTATCTGAATGTTGAATCTGAGAACGCGATTCTTAGGGTTCAGATGGCTGAACTTAGCAACAGATTGCAATCACTCAATGAAATTATCCAATACATTGAATCGAGTAATTCACTGTTTCAGGAAACGGATCAGTTGTTCAATGATTGTGGATTCTTGGATGCGTGGAACTCTTTTCCTGTTAATCAACCAGTTATGACCTCTAATGATATGTTGATGTATTGA 501 0.3952 MASPGGAYSSGTSSLQNSGSGSEGDMNMNMNQNHMQVNITDQKKRKRMQSNRESARRSRMKKQQHMEGLSAQIEELKKENNQITTNVGITTQMYLNVESENAILRVQMAELSNRLQSLNEIIQYIESSNSLFQETDQLFNDCGFLDAWNSFPVNQPVMTSNDMLMY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi60g00001 166 MobiDBLite consensus disorder prediction 1 69 - -
Vivi60g00001 166 FunFam BZIP transcription factor 41 92 - -
Vivi60g00001 166 SUPERFAMILY Leucine zipper domain 43 97 IPR046347 GO:0003700|GO:0006355
Vivi60g00001 166 CDD bZIP_plant_GBF1 44 94 IPR045314 GO:0003700|GO:0006355
Vivi60g00001 166 SMART brlzneu 39 103 IPR004827 GO:0003700|GO:0006355
Vivi60g00001 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 46 61 IPR004827 GO:0003700|GO:0006355
Vivi60g00001 166 Gene3D Classic Zinc Finger 37 94 - -
Vivi60g00001 166 MobiDBLite consensus disorder prediction 39 64 - -
Vivi60g00001 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 41 87 IPR004827 GO:0003700|GO:0006355
Vivi60g00001 166 Coils Coil 59 86 - -
Vivi60g00001 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 149 - -
Vivi60g00001 166 Coils Coil 94 128 - -
Vivi60g00001 166 MobiDBLite consensus disorder prediction 1 38 - -
Vivi60g00001 166 Pfam Basic region leucine zipper 40 84 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi60g00001 39 166 bZIP Transcription Factor Family AT4G34590 51.095 3.32e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi60g00001 bZIP_2 1.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi60g00001 K25786 - gmx:778139 184.111